Pampinifervens diazotrophicum: IAE16_04135
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Entry
IAE16_04135 CDS
T11281
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IAE16_04135 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdiz01007
]
IAE16_04135 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdiz03016
]
IAE16_04135 (cysS)
Enzymes [BR:
pdiz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
IAE16_04135 (cysS)
Amino acid related enzymes [BR:
pdiz01007
]
Aminoacyl-tRNA synthetase
Class I (G)
IAE16_04135 (cysS)
Transfer RNA biogenesis [BR:
pdiz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IAE16_04135 (cysS)
Prokaryotic type
IAE16_04135 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
tRNA-synt_1d
CysS_C
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
WPM32874
LinkDB
All DBs
Position
704631..706103
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AA seq
490 aa
AA seq
DB search
MSIRIYNTLTGKVEEFVPIDPPKVSIYTCGVTVYDDSHVGHGRSLIVFDVLRRFLEHMGY
RVRFVRNFTDVDDKIINRALQECMDFMTIANRYIASYYRDMEKIRVKPADVEPRVTEHIK
EIIEVIQGLIQKGYAYESGGDVYFSVSAFPEYGKLSKRNIEELEAGARVEPSEKKRNPLD
FALWKSAKAGEPAWDSPWGPGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPHHENEIA
QAEALTGKPFARYWVHNGLVTVGGQKMSKSLGNYITLKEVYSKYHPDILRLLVLFTHYRS
PLDFSWEKMEETKRAYERLIDALEGLELLKKLPTYEERGTHPLFEKVKEAEEEFFRALSD
DFNTPQALAVVYGLVSELNKVRNKAFSEGRISLQELQAYEFAVNSLIKNLRGVFGLLEDY
KPECEVERVVQRELEAGQVLDEGLLNLLVEVRNLVRKEKLYHISDLIRDKLKELGIVLED
TPAGTKWKRQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccgcatttataacacccttactggtaaggttgaggagtttgttccaatagac
ccgccaaaggtttccatatatacctgtggtgtgacggtttatgatgactctcatgtgggg
catgggaggagtcttatagtctttgatgttcttagacgttttcttgagcatatgggatat
agggtaaggtttgtgagaaactttaccgatgtggatgacaagataataaacagggctctt
caagaatgcatggactttatgactattgccaacagatacattgcaagctactacagggat
atggaaaaaataagggttaagcctgcggatgtggagccaagggtaacggagcatataaag
gagattattgaggttatacagggtcttattcaaaagggttatgcctacgagtctggtggt
gatgtttacttttctgtttctgcctttcctgagtatgggaaactttcaaagaggaatata
gaggagcttgaggctggtgcaagggtagagccatcggagaaaaagaggaatcctctcgac
tttgccctttggaagtccgcaaaggctggcgagcctgcttgggattctccttggggaccc
gggagaccgggttggcacacggagtgtgttgctatgatttttaagcatcttggtgagact
atagatattcatggtggtggtcttgacctcgtttttcctcaccacgaaaatgagatagct
caagcggaggcacttactggcaagccttttgctcgctattgggttcacaacgggctggtg
acggtgggtggtcaaaaaatgtctaaatctcttggcaactacataaccctaaaggaggtc
tactctaaataccatcctgatatccttaggctcttggtgctatttactcactacagaagc
cctctggacttttcttgggagaagatggaggagacaaagagagcttatgagaggctcata
gacgcccttgagggtcttgagcttttaaagaagctacccacttacgaggagcgtggcact
catcctctctttgaaaaggtcaaggaagcggaagaggagttctttagggctttgagcgat
gactttaatactcctcaagctcttgcggtggtctatggtcttgtctctgagctcaacaag
gtgagaaacaaagccttttctgaaggtagaatatctctgcaggagctacaggcttatgag
tttgcggtcaactctcttataaagaacctaaggggtgtttttggacttcttgaggactac
aagccagagtgtgaggtggaaagggtggtccaaagggagttggaggcggggcaggttttg
gacgaagggcttttaaaccttttggtagaggtcagaaacttagtaagaaaggaaaagctc
tatcacatttcagacctcataagggataagttaaaggagcttggcatagttcttgaggac
acacctgcggggacaaaatggaaaaggcaatag
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