Pampinifervens diazotrophicum: IAE16_04460
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Entry
IAE16_04460 CDS
T11281
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAE16_04460 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdiz03019
]
IAE16_04460 (groL)
03110 Chaperones and folding catalysts [BR:
pdiz03110
]
IAE16_04460 (groL)
03029 Mitochondrial biogenesis [BR:
pdiz03029
]
IAE16_04460 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdiz04147
]
IAE16_04460 (groL)
Enzymes [BR:
pdiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IAE16_04460 (groL)
Messenger RNA biogenesis [BR:
pdiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IAE16_04460 (groL)
Chaperones and folding catalysts [BR:
pdiz03110
]
Heat shock proteins
HSP60 / Chaperonin
IAE16_04460 (groL)
Mitochondrial biogenesis [BR:
pdiz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IAE16_04460 (groL)
Exosome [BR:
pdiz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IAE16_04460 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IAE16_04460 (groL)
Exosomal proteins of breast cancer cells
IAE16_04460 (groL)
Exosomal proteins of colorectal cancer cells
IAE16_04460 (groL)
Exosomal proteins of bladder cancer cells
IAE16_04460 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KfrA_N
Pho88
Tcp11
Motif
Other DBs
NCBI-ProteinID:
WPM32937
LinkDB
All DBs
Position
764008..765645
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKKVIYGEDARARLKAGVDKLANAVKVTLGPRGREVIIEKKWGTPLVTKDGVTVAKEI
ELKDPYENMGAQLVKEVASKTADVAGDGTTTATVLAQAIFTEGLKAIASGANPMDLKRGI
DKAVEKVIEEIKALSIPVSGRKEIEQVATISANNDPEIGKIIADAMEAVGKDGVITVEES
KSAQTTLETVQGMQFDRGYLSPYFVTNPDKMEAVLEDPYILIYEKKISNVKDLLPVLEQV
VRAGKPILIIAEDVEAEALATLVVNHIKGVIRACAVKAPGFGQRRKDYLQDIAILTGGTA
ITEELGIKLESVTLDMLGRADKVIVDKDNTTIVGGKGSKDNINARIEQIKKQIVETTSDY
DREKLQERLAKLAGGVAIIRVGAATEAELKEKKARVEDAVHATKAAVEEGIVPGGGVALV
RASEALETLKVENPDQQVGVDIVKKACRTPLRQIASNAGFEGYVVLEKVLQLGKEKGKNW
GFDASVGDYKDMVEAGIIDPTKVVRTAIQNAASVAGTMLTAEALVAEIPEEKKEKTPAPD
MPELD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagaaggttatctacggagaagacgcaagggcaaggctcaaagcaggtgtt
gacaaacttgccaatgcagttaaggtcacccttggaccaaggggtagagaggtcataatc
gagaaaaagtggggaacacctttggtcacaaaggatggtgttaccgtggcaaaggaaatt
gagctcaaagacccctatgaaaacatgggggcacaacttgtcaaggaggttgcatccaag
accgccgatgtggccggtgatggaactacaaccgcaacagtgctggcacaggctatattc
actgagggtctaaaggctatcgcctctggtgcaaaccccatggacctcaagaggggtata
gataaggcagtagaaaaggtcatagaagaaattaaggctctctccatacccgtaagtgga
aggaaggagatagaacaggttgccaccatatccgccaacaacgaccctgagatagggaag
ataatcgcagatgctatggaggcggttggtaaggatggtgtgataaccgttgaagagtcc
aagtctgcacagaccacccttgaaactgttcaaggtatgcagtttgacagaggatacctc
tctccgtactttgtgaccaacccagacaagatggaggcggttctggaagacccatacata
ctcatctacgaaaagaagatttccaacgtaaaagacctcttacctgtgcttgaacaggtg
gtcagggcagggaaacccatcctcataatagcggaggatgtggaagcggaagcccttgca
acccttgtggtaaaccacataaagggtgtcattagagcatgcgcagtaaaggcacctggc
tttggtcagaggagaaaggactacctgcaagacatagccatactcaccggcggaaccgcc
ataactgaagagctgggcattaagttggagagcgttacccttgacatgcttggaagagcg
gacaaggtcatagtggacaaggataacaccaccatagtgggcggtaaaggctcaaaggac
aatataaacgcaaggatagagcaaataaagaagcaaattgtggagactacctctgactac
gacagagaaaagctccaagaaaggcttgccaagttggcaggtggcgtagctattataagg
gttggtgcagccaccgaggctgagctcaaggagaagaaggcaagggttgaggatgcagtg
catgccacaaaggcagcagtggaagaaggtatagtccccggtggtggtgtggcattggtt
agggcttctgaagctcttgaaaccctcaaagtagaaaaccctgaccagcaggtaggtgtg
gacatagtaaagaaggcatgtaggacacctctcaggcagatagcttccaacgcaggattt
gagggttatgtggtgcttgaaaaggttctacagcttggcaaggaaaaaggcaagaactgg
ggctttgatgcgtcagtgggcgactacaaggatatggtagaagcgggtatcatagacccc
accaaggtggtaaggaccgccatacagaacgccgcttctgtggcaggaactatgctcact
gcggaagctctcgtggcggaaatacccgaagagaagaaggaaaagacaccggcacctgat
atgccagagcttgactaa
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