Pampinifervens diazotrophicum: IAE16_04760
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Entry
IAE16_04760 CDS
T11281
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IAE16_04760
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdiz01007
]
IAE16_04760
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdiz03016
]
IAE16_04760
Enzymes [BR:
pdiz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
IAE16_04760
Amino acid related enzymes [BR:
pdiz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
IAE16_04760
Transfer RNA biogenesis [BR:
pdiz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IAE16_04760
Prokaryotic type
IAE16_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
PI3K_P85_iSH2
DUF7391
Sld5
Sec8_N
7TM_GPCR_Srt
DUF6847
Rootletin
Nup49_C
Motif
Other DBs
NCBI-ProteinID:
WPM32993
LinkDB
All DBs
Position
complement(811651..814668)
Genome browser
AA seq
1005 aa
AA seq
DB search
MKDIGQYNHKAIESEHSKRWVEKALYSVEDPSPQNKFSVVIPPPNVTGSLHMGHALNATL
QDIVCRWQRMLGKDVVWVPGFDHAGIATQYVVDKQLQEKNIDRLHLGREEFLKRVWEWVP
ISRNAIRKQLEKLGVSVDWKRERFTLDEGFSRAVRHAFRRLYEEGLIYRAEYMVSWCPKD
LTALSDLEVEHEEEEGKLYYIRYPLEDGSGYITVATTRPETMLGDTAVAVHPQDERYKNL
VGKRVRLPLVDWKRIAMDGSEVENLIPIIADERVKPEFGTGAVKITPAHDPLDFEIGKSY
GLAFVQVMDQFANMNQNAGRFAGLDRYSARKRIVQELEELGLLEKVENHRHAVGKCYRCK
TVLEPTVSKQWFLKVSDPRIREKAIEVVKEGLVNFIPENWKKIYLQWMENLKDWCISRQI
WWGHRIPVWYCEDCGHENLFTDEDFDRVYDKLIFNLIADGKIRGEFTPEEVANILHSPSF
VHPELTVLDFYKKFAFHKYHSTEVDANSLRLFFTQDLNPMAILTEKKSRYRYESKKKTYR
FVLRCKKCGSENLRQETDVLDTWFSSALWPFGVFGWPEDTKDLKALYPTDPLVTGFDIIF
FWVARMVMMGTYFMEDIPFKDVYIHALIRDEKGQKMSKTKGNVIDPLDIVEKYGADALRF
TLAILTQQGRDIRLSEKRFEGYKHFANKLWNAGRFILMNLEPDLLTKLPYCAPPRSEDLW
IITKLNRTVEMVNKALSEYEFSEASRELYEFIWSEFCDWYIEFSKLRLYAKPEENVSEEE
RKAQEEAINKEKITVQATLLNVFEKTLRLLHPFMPFITEELWLELPTAHRESISLTEYPQ
HNPSEIYEEAESKVERLKEIISAIRSLRSDLRIEPSRKIRLYYKAGESKELVQEFMLHIL
SLARLESLEEVQTEPPNCVAGFSRDFEFYLPVEEGVKVQELINSYSKRLSEIEKSLQSFQ
QKLSNENFLSRAPEEEINKAKEALEELQEEKQKVESLLSLLNRLV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatagggcagtataaccataaggcaatagagtccgagcactcaaagaggtgg
gtagagaaggctctttattctgtagaagacccatctcctcaaaacaagttttctgttgtt
atacctccacctaatgtgacaggttctttgcatatgggacatgctctaaatgccaccttg
caggatatagtttgcagatggcagaggatgcttggtaaggatgtggtttgggtgccaggc
tttgaccatgcgggtattgcaacccagtatgtagtggacaaacagctacaggaaaagaac
atagacaggctacatttgggtagagaagaatttctcaaaagagtctgggaatgggttcct
atatcaagaaacgccataaggaagcaacttgaaaaacttggtgtcagtgtagattggaag
agggagaggtttacccttgacgaaggcttttcaagggcggtcaggcacgcctttagaagg
ctatacgaagagggccttatataccgtgcggagtatatggtaagctggtgtccaaaagac
cttaccgccctttctgaccttgaggtggaacacgaagaagaagagggaaagctctactac
atacgctaccctcttgaggacggctcaggctacataaccgttgctaccacaagaccagaa
accatgctcggagacactgcggttgcggtccatcctcaagacgaaaggtataagaacctt
gtaggtaagagggttagacttccccttgtggattggaaaaggatagctatggatggctca
gaggtggaaaaccttatccccattatagcggacgaaagggtaaagcctgagtttggaacg
ggagcggtaaagataactcccgcacatgaccctctggactttgaaataggaaagtcttac
ggtcttgccttcgtgcaggtaatggaccagtttgccaatatgaaccagaacgcaggcagg
tttgcaggacttgacaggtatagtgcgaggaaaaggatagtgcaagagcttgaagaactt
ggacttcttgaaaaggtagaaaaccataggcatgcggttggtaaatgctatcgctgtaag
actgttcttgagccaactgtctcaaaacaatggtttctaaaagtctcagacccacgcata
agagagaaagccatagaggtagttaaagaaggtcttgtaaattttataccagagaactgg
aaaaagatatacctacaatggatggaaaacctcaaagactggtgcatatctcgtcagata
tggtgggggcatagaatacctgtttggtattgtgaggactgcggacacgaaaacctgttt
actgatgaagactttgatagagtatatgacaagctcatctttaacctcatagcggatggc
aaaataagaggggagtttactccagaggaggtagccaatatacttcattctccctccttt
gtccatccagagctaactgtgttggacttttacaagaagtttgcctttcataagtatcac
tctacagaagtggacgctaattctcttaggctttttttcactcaagacctaaaccccatg
gctattctcacagaaaagaagagcagatacaggtatgaaagtaagaaaaagacctatagg
tttgttttgcgttgtaaaaagtgcggttctgaaaatctaaggcaagaaacagacgtgctt
gatacatggttttcctctgccctttggccctttggagtttttggctggccagaagataca
aaggacctcaaagccctataccccacagacccattagtaacaggctttgacattatcttt
ttctgggttgcccgtatggttatgatggggacttactttatggaggatattccttttaag
gatgtatacatacatgctcttataagagacgaaaagggacagaaaatgtccaagaccaag
ggtaatgtgatagaccctcttgatattgtggagaagtatggagcggacgcactgcgtttt
accttggctattcttacacagcagggaagggatataaggctctctgaaaagcgttttgaa
ggttataagcactttgccaacaagctgtggaacgcaggcaggtttatacttatgaacctt
gaaccagacctacttacaaagctaccttactgtgcgccaccaagaagtgaagacttatgg
ataatcacaaagctaaacagaaccgtagaaatggtaaacaaagccctttcagaatacgaa
ttctcagaagcctcaagggagctatatgagtttatatggagtgagttttgtgattggtat
atagagttctcaaagctcaggctatacgccaaaccagaggagaatgtgtcagaagaagag
agaaaggcacaagaagaagccataaacaaagaaaaaataaccgttcaggcaaccttactt
aatgtctttgaaaaaacccttaggcttttgcatccctttatgcccttcataacagaggag
ctatggcttgagcttcccacagcccacagagaaagcatatctcttacagaatatcctcaa
cataatccctcagagatttacgaagaggcggaaagcaaggtggaaaggctaaaggaaatt
atctccgccatacgctccctcagaagcgacctaagaattgagccctcaaggaagataagg
ctttactacaaggcaggagaaagcaaggagcttgtgcaggagtttatgcttcacattttg
agccttgcaaggttggagagccttgaggaggtgcaaacagaaccacccaactgtgtagca
ggcttttcaagagattttgagttttatctacctgtagaagagggtgtaaaggttcaagag
ctgataaactcctactcaaaaaggctttcggaaatagagaagtctttgcagagcttccag
caaaagctaagcaacgaaaacttcttaagtagagctccagaagaagagattaacaaagcc
aaagaagcccttgaagagctccaagaagaaaagcagaaggtggagagcttgctttctctt
ctgaatcgtttagtgtga
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