Pampinifervens diazotrophicum: IAE16_04790
Help
Entry
IAE16_04790 CDS
T11281
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAE16_04790 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdiz03021
]
IAE16_04790 (rpoZ)
03400 DNA repair and recombination proteins [BR:
pdiz03400
]
IAE16_04790 (rpoZ)
Enzymes [BR:
pdiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAE16_04790 (rpoZ)
Transcription machinery [BR:
pdiz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAE16_04790 (rpoZ)
DNA repair and recombination proteins [BR:
pdiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAE16_04790 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF2605
Motif
Other DBs
NCBI-ProteinID:
WPM32999
LinkDB
All DBs
Position
complement(820571..820801)
Genome browser
AA seq
76 aa
AA seq
DB search
MSRRPNIEEALKKVSSRYELVHAVAKRASQLLEKGEDIFIRDKTRGELIKKTFQAIEDIA
QGKVHVVKLRRSSEND
NT seq
231 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagacctaacatagaagaagcacttaagaaggtatcttcaaggtatgaactt
gtgcacgctgttgcaaaaagggcgagccagctactggaaaagggggaagatatctttata
agggacaagacgagaggcgagcttataaagaaaaccttccaggctatagaggacatagct
cagggtaaggttcatgtagtaaagttgaggagaagctctgaaaatgattaa
DBGET
integrated database retrieval system
