KEGG   Pampinifervens diazotrophicum: IAE16_05065
Entry
IAE16_05065       CDS       T11281                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pdiz  Pampinifervens diazotrophicum
Brite
KEGG Orthology (KO) [BR:pdiz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pdiz02048]
    IAE16_05065
Enzymes [BR:pdiz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     IAE16_05065
Prokaryotic defense system [BR:pdiz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   IAE16_05065
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C DEAD HSDR_N_2 7TMR-HDED DUF1572
Other DBs
NCBI-ProteinID: WPM31198
LinkDB
Position
complement(869930..873088)
AA seq 1052 aa
MYRKLDEEHYVENPFLYHLQKLGWKIYRQNKDNPEDVKEITSFNQGFEPIYGKSTKFRES
FREVILKDVLKESIKRINPWIEEDQINEVVRRITTPYKNSLLEINREIHDLLLENTSVSE
NRQTGERSPTVKFIDFHNLDNNSFIAISQFKVNITGTEKHIIPDIVLFVNGLPLVVVECK
SPTISDPIGEGIEQIKRYSNRRGANEGNEKLFWYNLFSVATSRQVAKYGTITSDYEDFVE
WKDPYPYTLSDISSEENITSQELLIYGMLSNRNLLDILHNFTIFKEDSKGGIAKIVPRYQ
QFRAVKKMVKRIKEGKTPEEKGGIIWHTQGSGKSLTMMYAVREIYHDPELSNFKIVFVTD
RRDLEKQLYATSSSVGFTVKLARSIHELKELLRTNTPDLVMCMIHKYQERELKSEFPVLN
TSPNILVMIDEAHRSQYKLLGANLRKALPNSIKIAFTGTPIEKTEMTFGEYIDKYSIKQA
VDDGVTVPIVYEGRVHSAELTEEEKANARFEDVFHALDTEERAKILERYTWRAYLEAEEV
IRDKARDMINHYVTHVFPNGFKAQVVTVSRLAAIRYKHALEKALKEKIEELKKENPHNID
LSQLEKLKIEVVISGAPNDPEEYKPYTDENKHEEIIKKFKLPFNKTDGELSGDVGIIVVQ
NMLITGFDAPLEQVMYLDNVINGHNLLQAIARVNRVYKNKSCGFVVDYVGVFKHLKEALA
IYADEDIEEITQVVINKSKSIDELKFNHNLIEEFFEKYSIENWRDNINECIDLLADEEIR
NEFIFLVRKFNKAIDAVLPDPEALKYVKDLKLLSFIKETARNRYRDEKLSIKDATRKIRE
IVDEYLKSKGVDPKIPPTPLFDDVFLEKLKGKTDKAKAQELEYAIKEYIERHYEEDPEFY
ERFSDKLKKILEEYRENWEMLFKELEILREEMKKGRSVEKNFGLDPKMEKPFFGLLKYMI
LGRKEDEELTNEEIKFLVNLTKDVTEIIKRESSLVDFWESYPKQKRLKSFILSHLLKHTK
SGSNLTREKILKKINEIPQRLLELAYHIYVKR
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgtatagaaaacttgacgaagagcattatgtagaaaatcctttcctttaccatcttcaa
aagttaggttggaagatttataggcaaaacaaagacaaccccgaggatgttaaagaaata
acttcatttaatcaaggttttgaacctatttatggcaaaagcactaaatttagagaaagt
tttagggaagttatacttaaagatgtattaaaggagtctattaagagaataaatccatgg
attgaagaagaccaaataaatgaagttgtaagaagaataacaacgccctataaaaattca
cttttagaaataaatagagaaatacatgacttactccttgaaaacacatctgtatcagaa
aatagacaaacaggagaaagaagcccaacagtaaagtttatagatttccataatcttgat
aacaattcatttattgccatatcacaatttaaagtaaacattacaggaacagaaaagcac
ataatccctgacattgtcctttttgtaaatggtttacctttagtagtagtggaatgtaaa
tcgccaactatttctgaccctattggagaaggaatagagcagataaaaagatattcaaat
agacggggggcaaatgaaggaaatgagaagttattttggtataatcttttttcggtggct
acatcaagacaagtagccaagtatggtacaataacttcagattatgaggattttgtagaa
tggaaagatccatatccttatactctttcagatataagttcagaagaaaacataacaagt
caagaactcttaatttatggaatgctttcaaataggaatcttcttgatattcttcacaat
tttacaatttttaaggaggattcaaagggcggaattgctaagattgtcccaagatatcag
caatttagagcagtcaaaaagatggttaagagaataaaggaaggtaaaactcctgaggag
aaaggtggaattatttggcatactcagggttctggaaagtctttaactatgatgtatgca
gtgagagaaatctatcatgatcctgagcttagtaactttaagattgtctttgtgacagat
agaagagatttagaaaagcaattatacgcaacttcaagcagtgtaggctttaccgtaaaa
cttgcaagaagtatacacgaattaaaagaattattgagaactaacactcctgatttagtt
atgtgtatgattcataagtatcaggaaagagaacttaagagtgaatttccagtgcttaat
acctccccaaacatacttgttatgattgatgaagctcatagatctcaatataaattactt
ggtgctaatttgagaaaagcattacctaactctataaaaattgcctttacaggaacacca
attgagaaaaccgaaatgacttttggtgaatatatagacaaatatagcattaaacaggcg
gtagacgatggggtcactgtaccaatcgtatatgagggaagggttcacagtgcagagtta
actgaggaagaaaaggctaatgcaaggtttgaggatgtatttcatgcgctagacacagaa
gaaagggcaaaaattttggaaaggtatacctggcgagcatatctcgaggctgaggaagtt
ataagagataaagcaagagatatgataaaccattatgtcactcatgtttttcctaatgga
tttaaagcccaagttgtaactgtttcaaggcttgcagcaattagatataaacatgcgttg
gaaaaagctttaaaagaaaaaatagaagagctaaaaaaggagaatcctcataatatagat
ttatctcaacttgaaaaattgaagattgaagtagtcatctcaggtgccccaaacgatcca
gaggaatataagccatatactgacgaaaataaacatgaagaaataataaaaaaatttaaa
ctaccttttaataaaactgatggagaattatctggtgatgttggtataattgttgttcaa
aatatgcttattactggatttgatgcaccacttgagcaagttatgtatttggataatgtt
ataaacggtcacaatttacttcaagcaattgcaagggtcaacagagtttataaaaataaa
agttgtggttttgttgtagattatgttggagtttttaagcatttaaaagaagctcttgct
atttatgcagacgaagatatagaagaaatcacacaagttgttataaataaatctaaaagc
attgatgagcttaaattcaatcataatctaatagaggaattttttgaaaaatatagcatt
gaaaactggagggataacataaatgaatgtatagatcttttagctgacgaagaaataaga
aatgaatttattttcttagtaagaaaatttaataaagcaatagacgctgttttaccagac
cctgaggcattaaaatatgttaaagatttaaaacttttgagttttataaaagaaacagca
agaaataggtatagagatgaaaagttatctataaaggatgccactagaaagataagagag
attgttgatgagtatcttaagtcaaagggtgttgatcccaaaatcccgcccactccactt
tttgatgatgtatttcttgaaaaattaaagggaaaaacagacaaagcaaaagctcaagaa
cttgagtatgctattaaggaatatattgaaagacattatgaggaagacccggaattctac
gagagattttcagataagttgaaaaagattcttgaggaatacagagaaaattgggaaatg
cttttcaaggagcttgagattcttagagaggaaatgaaaaaaggtagaagtgtggaaaaa
aactttggtttagatccaaagatggaaaaaccattttttggattattaaagtatatgata
cttgggagaaaggaagatgaagaacttacgaatgaagagataaagtttctcgttaattta
actaaagatgtaacagaaattattaaaagagaaagtagtcttgtagatttttgggaaagt
tatcctaagcaaaaaagattaaagtcttttatactatctcacttattaaaacacactaag
tctggttctaatttgacccgtgagaaaattttaaaaaaaataaatgaaatacctcagagg
ctacttgagcttgcgtatcatatttatgtaaagaggtag

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