Pampinifervens diazotrophicum: IAE16_05155
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Entry
IAE16_05155 CDS
T11281
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K02945
small subunit ribosomal protein S1
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IAE16_05155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pdiz03011
]
IAE16_05155
Ribosome [BR:
pdiz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IAE16_05155
Bacteria
IAE16_05155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_2
S1_RRP5
DUF2110
PCB_OB
Ribosomal_L21e
RuvA_N
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
WPM31215
LinkDB
All DBs
Position
complement(889462..891033)
Genome browser
AA seq
523 aa
AA seq
DB search
MGEFEKLLEESLEMKEIKRGEVIKGRVVKVDERNLYVDIGYKVEGIIPKEELPDTKVGDE
IKAVVVRFTKNGSPLLSYKKYLENKLTGFLKACYEKGKFITGTVVEKRDDGYIVDVSGLK
VFLPAKEALRNLREGKKIVAKIIELKKEEDGLKVTLSQRDYIKAQEEKKKTRLLSKIKVG
DVVEGRVIKIDPDKGITLLVGSVLRAFLPLEELSWGRDRNPYNYAEIDERLRVKVKRIPK
DGQFIFVSLKETKENPWRKAEQSIQKGQVLNGRVVEIRENGLILEVMEGVEGFVPKEEIS
YDGTTPKKADRVSAQVLDFDPKRHKLVLSIKKTLPKPWEEFLKEHPAGSRVVGTVERIEG
AKAIVSLEKGVQGIIHRADLAWVKPGRIEEVLQAGQSLEFAVLGLDGRFVKLGLKQLTEN
PWETVLKNYKVGDRVKLKVRSMHPFGAFLQFPEGIEGLLPISEIPKGVKLQEGQEVEAKI
IELSQDKITFSMKEKEEEKKEDIITTSDKGFTLGDILKKKMKI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagtttgagaaattgcttgaagaaagtcttgagatgaaggaaataaaaagaggg
gaggtgataaagggaagggtggtaaaggtagatgaaaggaatctctatgtggatataggt
tacaaggtagagggtataatacctaaggaagagctaccagatacaaaggtgggtgatgaa
ataaaggctgtggtcgttaggtttaccaagaatggctcccctctcttgtcttacaagaaa
tatcttgaaaacaagctaacgggctttttgaaagcctgctatgaaaagggcaaattcata
acagggacggtggtagaaaaaagagacgatggctatatagtagatgtgagcggtttaaag
gttttccttcctgctaaggaagctcttagaaacctcagagaaggcaaaaaaatagtggca
aagataatagaactcaaaaaagaagaggatggtcttaaggtaactctctcccaaagggat
tatataaaggctcaagaagaaaagaagaagacaagacttctttctaagataaaagtggga
gatgtggtagagggcagggtgataaagatagacccagataagggtataaccttgctggtg
ggtagtgtcctaagggccttcttgcctcttgaggagcttagctggggtagggacagaaac
ccatacaattacgcagagatagacgaaagactaagggtaaaggtcaagagaatacccaag
gatgggcagttcatatttgtgagcttaaaggaaacaaaggaaaacccatggcgtaaggcg
gagcaaagcatacaaaagggtcaagtgttaaacggaagggtggtagagataagggaaaat
ggtcttatccttgaggttatggagggtgtagagggctttgtgccaaaggaagagatatct
tacgatggaactacacccaagaaggccgatagagtgtccgctcaagtgcttgactttgac
cccaaaaggcataagttggttctcagcataaagaaaacccttccaaaaccgtgggaagag
tttctaaaggaacatccagctggtagtagagttgtgggaactgtggaaaggatagagggg
gcaaaggctatagtcagtctcgaaaagggcgtgcagggtattatccatagggctgatctt
gcttgggtaaaacccggaaggatagaggaagtgctgcaggcaggtcaatctcttgagttt
gcggtgcttgggcttgatggaaggttcgtaaagctcggtcttaaacaacttacagaaaac
ccttgggagacagttcttaaaaattacaaagtgggagatagggtaaagctaaaagtaagg
agtatgcacccctttggtgcctttctgcaatttccagagggtatagagggtcttttaccc
atatcggagataccaaagggtgtgaaacttcaggaaggtcaagaggtggaagcaaaaata
atagagctttctcaagacaagataacctttagcatgaaggagaaagaagaggagaagaag
gaagatataataaccacctcagacaagggctttacactgggtgacatactcaagaaaaag
atgaaaatatga
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