Pampinifervens diazotrophicum: IAE16_05400
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Entry
IAE16_05400 CDS
T11281
Name
(GenBank) YchF/TatD family DNA exonuclease
KO
K03424
TatD DNase family protein [EC:3.1.21.-]
Organism
pdiz Pampinifervens diazotrophicum
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
IAE16_05400
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Gene cluster
GFIT
Motif
Pfam:
TatD_DNase
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
WPM31262
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Position
complement(930297..931661)
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AA seq
454 aa
AA seq
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MIDTHCHLDLLKKEDLEETLQDKGLEYLITVGYDKKTIKNAIRLSEENPHVFCAVGFHPH
EADKVKEEDLLWLKETAQRYPKVKALGEMGLDFYKDYSDRKKQEEGFRKQIAIAKELGLP
IVVHSREAEEETIRILKEEKAYEVGGVMHCFTGSYEFMKACLDLGFYISYSGIITYPNAQ
NLREVVKRTPTYRLLIETDAPFLAPQPVRGKPNKPPYIRYTAEVMAQLIPNSSFEDIERM
TSENAKLLFNLSTNGHKETITYVINNKLYINLTNKCNLHCEFCQRERERNFMVKGYWVWV
SRDPSVEEVIREIGDPTKYEEIVFCGYGEPTLRFSALKEIAKWVKEKGGKVRVDTNGLMF
TFLPKEKLRELKGLVDVWSVSLNAQDKETYNKVCRPAQGDAFEKVVEFIKEAVKEGFEVV
ATAVDYEGVDMKKTEELARSFGARFRGRIYESVG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatagacacgcactgccaccttgaccttttgaagaaggaagacttggaggaaaccctc
caggacaagggattggagtatcttataacggtaggatacgataagaaaaccataaaaaac
gccataaggctctctgaggaaaaccctcatgtcttttgtgcggtaggatttcatccccat
gaggcggacaaggtaaaggaggaagacctactgtggctaaaggagaccgcacaaagatat
ccaaaggtgaaagctctcggagagatgggtctggatttttataaggactactctgataga
aaaaaacaagaagagggctttagaaaacagatagccatagctaaggagcttggacttccc
attgtggtgcactcaagggaggcggaagaggaaaccataaggattttgaaagaggagaag
gcatacgaagtgggtggcgtaatgcactgttttacgggttcttacgagtttatgaaagcc
tgtcttgacttaggcttttatatatcctactctggcataattacctaccccaacgctcaa
aacctcagagaagtggtaaagaggacacctacctacagactgcttattgaaacggatgca
cccttcttggcacctcagcctgtgcgaggcaaacccaacaagccaccctacatacgctac
accgcagaggttatggcacaacttatccccaacagctcctttgaagacatagagaggatg
acctcagaaaacgccaaacttctctttaacctttccaccaacggtcataaggagaccata
acctatgtaataaacaacaagctatacataaaccttaccaacaagtgcaatctccattgt
gagttttgtcaaagagaaagggagagaaactttatggtaaagggctattgggtttgggta
tccagagacccctctgtggaagaggtgataagggaaataggagaccctacaaaatacgaa
gagatagtcttctgtggatacggcgagcctactctgaggttttccgctctcaaggaaata
gccaagtgggtaaaggagaagggtggtaaggtgcgtgtggataccaacgggctcatgttt
accttccttccaaaggaaaagttaagagaattaaagggtcttgtggatgtgtggtcggtg
agccttaacgcacaggacaaggaaacctataacaaagtctgcagacccgcacaaggagat
gcctttgaaaaggttgtggagtttataaaagaagctgtcaaggaaggctttgaggtggtt
gccaccgccgtggactacgagggcgtggatatgaaaaaaaccgaagagcttgcacgctct
tttggagcgaggttcagaggcaggatatacgagtccgtgggttaa
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