Pampinifervens diazotrophicum: IAE16_07945
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Entry
IAE16_07945 CDS
T11281
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pdiz Pampinifervens diazotrophicum
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdiz03400
]
IAE16_07945
DNA repair and recombination proteins [BR:
pdiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IAE16_07945
Archaeal homologous recombinant proteins
IAE16_07945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
CEP209_CC5
SMC_N
Snapin_Pallidin
zf-FPG_IleRS
Cas6b_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WPM31747
LinkDB
All DBs
Position
complement(1360855..1364250)
Genome browser
AA seq
1131 aa
AA seq
DB search
MRPIRLELENFTIYRGKHSIDFSPLNFFAIKGKTGAGKTSLIDAICYALYGKVPRYGGER
AHAYLVSKGQRFMRVSLEFSVRGRRYKIEREYVEDKRRNLSEFRFYEEGKPKPFRERELE
DYLKNVLRLDYSIFTKVILLPQNQFDRFLKPQNQRERREILNSLLGFSELILALKDLVGQ
EYKLLVGKLQLMQQRFEQLAYITPELILQREKELENVKKEYKELSEGASKLTNLLLKCKE
RDSLLQEYKKTSEDLDRLLTQEEDIARKKQLLETVLEILPYLPKVEQYESLLLQEEKLKE
EKKEKELDLKKYHEERELVEQEFKSIEVEFKKLESYNNKRLEISQTLQLIEQYMGFKRDL
EKIEGDIRHTEEQKDLYMTELKDLRERSHRGYEKIRDVEYAIQELEEKGVEQEFIQSQRI
KEQVENTRRLEKEEEQVKIQVEILEKELKGKEEKLNKALKEREELELAIGQTEGDISNLR
SFIERESELLQEGFRLKEQLSKALELKQVSEERAIYEKRLQELEKNLSSIEEQLEGLKER
RIDVYAFEIRSRLTEGDVCPVCGHRVEHIELKEQGEDITSLIKRQEELEKTANSLRSELL
ENQAKVSILKTKEKELQEALYGLSTEDIQGRLSQVEGILKEIEEKKRLLRDREQTLRNLK
TKHSELSKFIDNLKFEEGKIREEFLSKNSILERLVEEKNSLMKSLGEVLDVVLERVKKAE
KEYEELRLLKERERKFKQRFEEIQKELMEKEKKYTELEERLKGLIQQKRSLEEKLMDLGN
RIIKATGESPSELLAHKLRKQSQELERRVKEVQESYETTSSYLQRLREQEARLISDIQNI
ERMLSQLQSQKQSMASEIYSLQERFGSLQNLKSCALSQEQIKSLQQEIEEYNKERHNLEN
KLKELELKLQGLKELPETFRMEEDLKGLEASIEENRRLHGSLDSEIKKLKEDLSEKQSLE
KSLSELRMELSLYERLRSDLVDNQFPEYVSQLMLKRIVDRASYYLFKFTSGLFTFDLLEG
DLHVYDHSTGYHRIVSSLSGGETFLASLSLAFAVADILSQNAPLESLFIDEGFGSLDRET
RDSLSEFFDMIRQSTDRLVGVITHVEDIAEKFSQRIEVEKREGYAKLKVIY
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgagacccataaggcttgaacttgaaaacttcaccatatacagaggaaagcacagcatt
gacttttcaccccttaacttttttgccataaagggtaaaacgggagcgggaaagacaagc
cttattgatgccatatgctacgccctttatggaaaagtcccaagatacggaggagaaagg
gcacatgcatatcttgtctcaaagggtcagaggtttatgcgtgtatctttagagttttct
gtaagaggaaggagatacaaaatagaaagagagtatgtggaagacaaaaggagaaatctg
tcggagtttaggttttacgaagaaggtaaacctaagcctttcagagaaagagagttagag
gactatctcaaaaatgtgcttaggcttgactacagtatctttacaaaggttatactccta
cctcaaaaccagtttgacaggtttttaaagccacaaaaccaaagggaaaggagagaaata
ctcaattccctacttggtttttctgagcttatccttgcactaaaagacctggtgggacaa
gagtataaactcctcgttggcaagctccagcttatgcaacaaaggtttgaacaactggct
tatataactccagagcttatacttcaaagggaaaaggagcttgaaaatgtaaaaaaggaa
tataaggagctttcagaaggagcatccaaactaacaaacctgcttttgaagtgcaaagaa
cgggacagccttttacaggaatacaaaaaaacatcggaagacttagataggctattaact
caagaggaggacatagcacgcaagaaacaacttcttgaaactgtccttgaaatacttccc
taccttccaaaggtggagcagtatgagagccttctcttacaggaagaaaagctaaaagaa
gagaaaaaggaaaaggagcttgacctgaaaaagtatcatgaggaaagagaacttgtggag
caggagtttaaaagtatagaagttgagtttaaaaaacttgaatcatacaacaataaacga
cttgaaataagtcaaactctacagcttattgaacagtatatgggtttcaaaagggacttg
gagaagatagaaggagatataaggcatacagaagagcagaaggacctctatatgacagag
ctaaaagacctaagagaaaggtctcacagaggctatgagaagataagagatgtagaatat
gccatacaagaacttgaggaaaagggagtggagcaggagtttattcagtctcagaggata
aaagagcaggtggaaaacacaaggagattggaaaaggaagaggaacaggtcaagatacag
gtggaaatccttgaaaaagagctaaaagggaaagaggagaagctaaacaaggcgttgaaa
gaaagggaggagttggagcttgctataggacaaacggaaggagatatatctaaccttagg
tcttttatagaaagagaaagcgaactgcttcaagaaggctttaggcttaaggagcagtta
agtaaggctttggaactcaaacaggtaagcgaggaaagggctatatacgagaaaagactg
caagaattggagaaaaacctaagctctatagaggagcagttggaagggctaaaggaaaga
aggattgatgtgtatgcctttgagataaggtcaaggttaacggaaggagatgtgtgtcct
gtatgcggtcatagagtggagcatatagaactcaaagagcagggagaagacattacgagc
ctaatcaaaaggcaagaggaactagaaaagaccgcaaatagcctcaggtctgaacttctt
gaaaatcaagccaaggtttccatcttgaaaactaaggagaaggagttgcaagaggcacta
tatgggctttccacagaggatattcagggaaggctttctcaagtagagggcattctaaaa
gaaattgaggaaaaaaagaggcttctaagggacagggaacaaaccttaagaaacctcaaa
actaaacactctgaactatccaagtttatagacaacttaaagtttgaagagggcaaaata
agagaggagtttctctcaaagaactctatccttgaaaggctcgtagaagagaagaactct
ttgatgaagtctttgggagaggttttggatgtggtgcttgaaagggtcaaaaaggcagaa
aaggagtatgaggagcttaggttattgaaggagagggaaaggaagtttaagcagaggttt
gaggagatacaaaaagagcttatggaaaaggaaaagaagtatacggagcttgaggagagg
ctaaagggactaatccagcagaagaggtctttggaagaaaaacttatggacttaggcaat
aggattataaaagctactggagaaagtccctctgagctcttagcacacaagctaagaaaa
caaagtcaagagttggaaagaagggtaaaggaggtgcaagaaagctacgagacgacctct
tcctacctgcaaaggttaagagaacaggaagcaaggcttatctcagatattcaaaacata
gagaggatgctttctcaactacagtctcaaaaacaaagcatggcaagtgagatatactct
ctccaggagagatttggtagtttacaaaacctcaaaagctgtgccctaagtcaagaacag
ataaagagccttcagcaggaaatagaagaatataacaaagaaaggcataaccttgaaaac
aagctcaaagagttagagttaaagctccaaggtttaaaggagcttcctgagacattccgc
atggaagaggacctaaagggattggaagcgtctattgaggaaaacaggaggttgcatgga
agtttggatagtgaaataaaaaagctaaaagaagacctctctgaaaagcaaagtttggag
aaaagcctttctgagcttcgcatggaattaagcctttatgaaaggttaaggagcgacctt
gtagataatcaatttccagagtatgtgagccagcttatgctaaaaaggatcgttgatagg
gcgagttattacctttttaaattcacttcgggactttttacctttgacctgcttgaagga
gacctgcatgtctacgaccactccacaggatatcataggattgtttccagtttaagcggt
ggtgagacctttttggcgagcctttctcttgcctttgcggtggcggacatactctctcaa
aatgcacctcttgaaagccttttcatagatgaaggctttggttctttagatagggaaaca
agagattccctttctgagttttttgatatgataaggcagtccacagacaggcttgtggga
gttataacccacgtggaagacatagcggaaaagtttagtcaaagaatagaagtggaaaaa
agggagggctacgcaaagctcaaggtcatatattaa
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