Pampinifervens diazotrophicum: IAE16_09055
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Entry
IAE16_09055 CDS
T11281
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz00860
Porphyrin metabolism
pdiz01100
Metabolic pathways
pdiz01110
Biosynthesis of secondary metabolites
pdiz01120
Microbial metabolism in diverse environments
pdiz01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IAE16_09055 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdiz04147
]
IAE16_09055 (hemB)
Enzymes [BR:
pdiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
IAE16_09055 (hemB)
Exosome [BR:
pdiz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
IAE16_09055 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
YAcAr
Radical_SAM
DUF5707
Motif
Other DBs
NCBI-ProteinID:
WPM31959
LinkDB
All DBs
Position
complement(1575033..1576016)
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AA seq
327 aa
AA seq
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MEFPKLRPRRLRRKENIRRLVRETKLSLDDLIYPIFVRYGQNIVEEVPSMPGVYRYSLDK
VVDAVKEVRDLGIPAIILFGIPEHKDEVGSDTWSDEGIIQRALRLIKKEVPDMYLITDVC
FCEYTTHGHCGVLCDGDVHNDLTLENLKKQAISHAKNGADMLAPSGMMDGMVRAIREALD
SSGFENIPIMAYSAKYASAFYGPFREIAESAPAFGDRRSYQMDPANSREAIKEILLDVQE
GADIVMVKPALAYLDIIAKVKEHTLLPVCAYNVSGEYAMIKAGGKLGWIDEKRVMIETLL
SIKRAGADMIITYFAKDVARLINSGEV
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggagtttccaaagctaagaccaaggagattaagaaggaaggaaaatatccgtaggctt
gtgagagagaccaagctgagccttgacgaccttatataccccatctttgtgagatacgga
cagaatatcgtggaagaagtcccaagcatgcctggagtataccgctatagccttgacaag
gtagtggatgcagtaaaagaggtaagagaccttggcatacctgccataatactctttggc
ataccagagcacaaggatgaagtgggctcggacacttggagtgatgaaggcattatacaa
agggctctaagactcataaagaaggaagtgccagatatgtatcttataacggatgtatgc
ttttgtgagtatacaacgcatggacattgtggagtgctgtgtgatggagatgttcataac
gacctgacccttgaaaaccttaagaagcaagccatatcgcatgccaaaaatggtgcggac
atgctcgcaccctctggaatgatggatggtatggtaagggctataagagaagccttagat
tcctctggatttgaaaacattcccataatggcatattccgccaagtatgcttctgccttt
tatggaccctttagggaaatagctgaatccgcaccagcttttggagatagaagaagctac
cagatggacccagcaaactcaagagaagccattaaagagatacttttggatgtgcaagag
ggagcagacattgtaatggtaaaaccagctttagcttaccttgatataatagcaaaagta
aaagaacacactctcctgccagtgtgtgcttacaatgtaagtggtgaatatgccatgata
aaagcaggtggcaaacttggctggatagatgagaagagggttatgatagaaactctactt
tccataaagcgtgctggtgcggacatgataatcacctactttgcaaaggatgtggcaagg
ctcataaacagtggggaagtttga
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