Pampinifervens diazotrophicum: IAE16_09235
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Entry
IAE16_09235 CDS
T11281
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz00300
Lysine biosynthesis
pdiz00470
D-Amino acid metabolism
pdiz01100
Metabolic pathways
pdiz01110
Biosynthesis of secondary metabolites
pdiz01120
Microbial metabolism in diverse environments
pdiz01230
Biosynthesis of amino acids
Module
pdiz_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IAE16_09235 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IAE16_09235 (dapF)
Enzymes [BR:
pdiz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IAE16_09235 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
EACC1
Motif
Other DBs
NCBI-ProteinID:
WPM31993
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All DBs
Position
complement(1606087..1606932)
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AA seq
281 aa
AA seq
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MNFTKLQGSGNDFIVIDNRDGKVYELLKRLELDIKDFVIALCKQHTGVGADGLILIEDPQ
DPKNHFKWQFFNSDGSVAEMCGNGSRCAVRFAYEKGIVGEEVRFETLAGVIKAWVKEGGK
RVKVQLTSPKDYREVSLQVDGLHIEGSFINTGVPHFVAVVENLQDLNVVKLGRAIRFHKE
FEPKGTNVNFIEKLSDKAIRIRTYERGVEGETLACGTGATASAIVAYMKGLVKEKPVEVH
TKGGEILRIDFNEDLREVFLEGAVCRVFEGFFSEEDLLCMR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaactttacaaaattgcaagggtctggaaacgactttatagtcatagataacagggat
ggaaaggtatacgagcttttaaagaggcttgagcttgatataaaagactttgtgatagca
ctctgcaagcaacacacgggcgtaggtgcggatgggcttatccttatagaagaccctcaa
gacccaaaaaaccacttcaaatggcagtttttcaactccgatggctctgtggcggagatg
tgtggcaacggctctcgctgtgcggtaaggtttgcctatgagaagggtatagtaggcgaa
gaagtgcgttttgaaacccttgcgggtgtgataaaagcgtgggtcaaggagggtggaaaa
agggtaaaggtccagcttacaagcccaaaggactacagagaggtatctttgcaggtagat
ggtctccatattgaaggtagctttataaacacaggtgtgcctcactttgtggcagtggtg
gaaaacctgcaagacctaaatgtggtaaagctgggaagggctataaggtttcacaaagag
tttgagcctaagggcacgaatgtgaactttatagagaagctctcagacaaggctataagg
ataagaacttacgaaagaggcgtggaaggagagacccttgcctgtggaaccggagcaacc
gcatcagccatagtggcttatatgaagggtttggtaaaggaaaagcccgtggaagtgcat
acaaaaggtggtgaaattctccgaattgactttaacgaggacttaagggaagtattcctt
gagggtgcggtttgcagggtctttgaaggctttttctcagaagaagacctgctttgcatg
agatag
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