Pseudoalteromonas lipolytica: D0907_00775
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Entry
D0907_00775 CDS
T05890
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj00300
Lysine biosynthesis
pdj00470
D-Amino acid metabolism
pdj01100
Metabolic pathways
pdj01110
Biosynthesis of secondary metabolites
pdj01120
Microbial metabolism in diverse environments
pdj01230
Biosynthesis of amino acids
Module
pdj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0907_00775 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D0907_00775 (lysA)
Enzymes [BR:
pdj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D0907_00775 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AXV63911
UniProt:
A0AAD0S0B8
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All DBs
Position
complement(161853..163106)
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AA seq
417 aa
AA seq
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MDFFNYNNNQLFAEDIAVKELADQYGTPCYIYSRKTFERHYLAFAEAAKSHKSLVCYAVK
ANSNIAVLNILARLGSGFDIVSKGELARVIAAGGDASKVVFSGVAKTADEIAYALELGIK
CFNVESVAELDRISEVATSLNRVAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS
VYQYAASLPGLNITGVDCHIGSQLTEIKPFLAALEKVLTLIEELKAVNITLTHLDIGGGL
GVPYNGETPPHPSEYVDKITSRLANYQDLELIFEPGRAIAANAGILVTKVEFIKQNQDKY
FAIVDAGMNDMLRPSLYQAWQKIVPVEPREDGTPRQNYDIVGPVCETGDFLGKDRELALH
AGDLLAQRSAGAYGFTMSSNYNSRPRVAEIMVDGKQSHLIRQRETLESLWQGEKILP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttaactacaataataatcagctgttcgctgaagacatcgctgtcaaagag
cttgccgaccaatacggtacgccctgctatatctattcacgtaaaacctttgagcgccat
tatctcgctttcgccgaggcagctaaatcacacaaaagtttagtctgttacgccgttaaa
gcgaattcaaacattgctgtattaaatattttagcgcgcttaggctctggttttgacatt
gtttctaaaggcgagttagctcgcgttattgcagccggtggcgatgccagtaaagtggta
ttttctggcgttgcaaaaactgctgacgaaattgcctacgcgcttgaattggggatcaaa
tgttttaacgttgagtcggttgctgagctagaccgtatatcagaagtagcaacttcacta
aaccgtgttgcacctatctcgattcgcgtgaacccggatatcgatgccaaaacacacccg
tatatctcaaccggtttaaaagaaaataaatttggtattgatattcaaacagcggtcagc
gtttatcaatatgcagcatcgcttccaggtttaaacattactggggttgactgccacatt
ggctcacagcttacagaaattaagcctttcttagcggctctggaaaaagtgctgacctta
atcgaagaattaaaagccgtgaatatcacacttacccacctagatattggtggaggatta
ggcgtgccttataatggtgaaacaccgcctcacccaagtgaatacgttgataaaatcaca
tctcgcttagctaattatcaagacttagagcttatttttgagcccggtcgagccattgca
gctaatgcgggtattttagtgaccaaagttgagtttattaaacaaaatcaagacaaatat
tttgccattgttgatgccggtatgaacgatatgctgcgcccatctctttaccaagcatgg
caaaaaattgtgcctgtcgaaccgcgcgaagatggcacgccacgtcaaaactacgacatt
gttggcccagtgtgtgaaacgggtgactttttaggaaaagaccgtgagcttgcgctacat
gctggtgacctactggcgcaacgcagtgctggcgcatacggctttaccatgagctcaaat
tacaactcacgtccacgcgtcgctgagatcatggtcgatggcaagcaaagccacttaatc
cgccaacgagaaaccttagaaagcctttggcaaggtgagaaaattttaccataa
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