Pseudoalteromonas lipolytica: D0907_00855
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Entry
D0907_00855 CDS
T05890
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdj03009
]
D0907_00855 (dbpA)
Enzymes [BR:
pdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D0907_00855 (dbpA)
Ribosome biogenesis [BR:
pdj03009
]
Prokaryotic type
rRNA helicases
D0907_00855 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AXV63925
UniProt:
A0AAD0WB92
LinkDB
All DBs
Position
178752..180140
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AA seq
462 aa
AA seq
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MTATAFSSLALPQELIDNLSTLGYSQMTPVQAQSLPVILQGKDIIAQAKTGSGKTAAFSL
GVLAKLNVKRFRIQSLILCPTRELAEQVAEEVRKLARSIHNIKVLTLCGGVSIGPQIGSL
EHGAHIIVGTPGRVDDHIRKGTLRLDDVETLVLDEADQMLDMGFQDTLDAIVECIPAQRQ
TLLFSATYPKSIAAIAERVLSNPETIKVEEEQAKSTIKQYFYKLDNNKQRFNTLKLLLLK
FQPESCVVFCNTKVETQQICDDLFAEGFSAVALHGDLEQRERERTLIRFSNKSASILVAT
DVAARGLDINDMDMVVNYHLAHDPQTHVHRVGRTGRAGKKGIACSIYGEAEQFKVAQIGD
HYEKDFEPEPIPPFSLLEKPAYKPTMATLMIDAGKKQKIRAGDILGALTGKEGVAGHQVG
KINVLDNVAFIAVERAAVKPALRKLTEGNIKKRKIRARRLTR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctactgctttttcatcgttggctttgccgcaagagttaatcgataatttatcg
accttaggttattcacaaatgacgccagtgcaagcgcaaagtttgccggtcattttgcaa
ggaaaagatattattgcccaagctaaaactggctcagggaagactgctgcattcagttta
ggcgtgctggctaaattaaatgttaaacgttttcgaatccaatcattaattctctgccca
acgcgtgaattagctgagcaggttgcagaagaagtccgtaagttagcgcgtagtattcac
aatattaaagtacttactttgtgtggtggcgtatcaattggaccgcaaattggttcgctt
gaacatggtgcacatattatcgtaggtacaccagggcgagtcgatgaccatattcgtaaa
gggacattgcgcttagatgatgttgaaactttagtgcttgatgaagccgatcaaatgctc
gacatgggttttcaagataccttagatgcgattgttgaatgcattccagcccagcgtcaa
acattattgttcagtgcgacgtatccgaaatcaatagcagcaattgcagagcgtgtattg
agcaatcctgagactataaaagttgaagaagagcaggcaaagagcacaataaaacagtac
ttttacaaacttgataataacaagcagcgctttaatactttaaaacttttattgttaaag
tttcagccagaaagttgtgtggtgttctgcaacacgaaagttgagactcagcaaatttgt
gatgacctttttgctgaaggatttagtgccgtcgcattgcatggtgatttagaacaacga
gaacgagaacgtacattaattcgtttttctaataaaagcgcttcaattttggtcgcgacg
gatgttgctgcacgcgggcttgatattaatgatatggatatggtggtgaattaccactta
gcacatgaccctcaaacacatgtgcatcgtgtgggccgcaccgggcgtgcaggtaaaaaa
gggattgcctgttcaatttatggtgaagctgagcagtttaaagtggcacaaataggtgat
cactatgaaaaagattttgaaccagagcctattccgccgtttagtttattagaaaagcca
gcttataagcctacaatggcaacgcttatgattgatgcaggtaaaaagcagaaaattcgt
gcgggtgatattttaggggcgctaacgggtaaagaaggggtcgcgggacaccaagttggt
aaaataaatgtacttgataatgttgcctttattgctgttgagcgtgctgctgttaagcct
gctctgcgtaaattaacagaaggtaatattaaaaagcgtaaaatacgagctcgtcgatta
acgcgctaa
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