Pseudoalteromonas lipolytica: D0907_01550
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Entry
D0907_01550 CDS
T05890
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
D0907_01550
SSDB
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Paralog
GFIT
Motif
Pfam:
BSH_RND
YknX_C
Beta-barrel_YknX
RND-MFP_C
Biotin_lipoyl
BSH_YknX
BSH_CusB
Beta-barrel_AprE
BSH_CzcB
Beta-barrel_RND_2
CzcB_C
HH_EMRA
HH_AprE
BSH_LcnD
SAF
PTS_EIIA_1
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
AXV64052
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Position
complement(336834..338000)
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AA seq
388 aa
AA seq
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MKKAIIIGLAITAFAALLISKQITNSKKVPEMHVASVEQGSIADSILASGNLVFNTQVQL
RSEVTGRVAKVFVEEGESVTEGDILMRLDTTAFESEVARNKAVLRATEIDIKHSETRLKN
IERQLSRQKELYEVGLAGQEVYENLQNARDLAEIDIEAKREAYHQAQASLLIAEDRLNKS
VFRAPMSGLLASVNIKEGETVIAGTTNIIGSDLMLVADPSAILAELRVDETDIAGIKLNQ
HADIYAAAYPNQPFTGKVINIGTSAKNQPGSQGLSFKVKVLLDATERQLYAGMSCRAEIA
TSITENGLKLPIEAIQKEDDTYFVWKLNADNTVTKSPVKVGISSDIEQAITQGVTVGERI
VIGPARPLSSLKDGDTVAIKDSLVKGAS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagccatcattattggccttgctatcacggcatttgcagcattactcatatct
aagcaaataacaaacagcaaaaaagtgcctgaaatgcatgtagcaagcgttgaacaaggt
agtattgctgattcaattttggcctctggtaatctggtatttaacacccaagtacagtta
cgctcagaagtcactgggcgggttgcgaaggtatttgttgaagaaggtgaaagtgtcacc
gaaggcgatattttaatgcgccttgataccactgcatttgaatctgaggtggcgcgaaac
aaagcggtgttgcgtgcaaccgagattgatattaaacacagcgaaacacgcctgaaaaat
attgagcgacaattaagtcgacaaaaagagctctatgaagtcgggcttgcaggccaagaa
gtgtatgaaaacctacaaaacgcgcgtgatttagccgaaattgatattgaagcgaaacgt
gaagcctatcatcaagcacaagcgtcgttgctgattgccgaagaccgtttaaataaaagt
gtgtttcgcgcacccatgagtgggctactcgcttctgtcaacattaaagaaggtgagacc
gtgatagccggtacgacaaacattattggttcagacctaatgctagtcgccgaccccagt
gcaattttagcggagttacgggttgatgaaactgatattgctggcataaagttaaatcaa
catgccgacatttatgccgcagcctaccctaatcaaccctttacaggaaaagtcataaac
attggcacttcagcaaaaaaccaaccaggttcacaagggctatcgtttaaagtcaaagtg
ctgcttgatgccactgagcgtcaactttatgctggtatgagttgccgagctgaaattgcc
acaagcattaccgaaaatggtttaaaactccccattgaagcaattcaaaaggaagacgat
acctactttgtatggaagctaaacgccgataacaccgtcactaaatcgcctgttaaggtg
ggaatttcatcagatatagagcaagcgataacacagggtgtaacggtgggtgagcgcatt
gtgattggtcctgcaagaccgcttagttcattaaaagatggcgataccgtggcaattaaa
gacagccttgtaaaaggggcatcctga
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