Pseudoalteromonas lipolytica: D0907_01810
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Entry
D0907_01810 CDS
T05890
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdj03016
]
D0907_01810 (trmA)
Enzymes [BR:
pdj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
D0907_01810 (trmA)
Transfer RNA biogenesis [BR:
pdj03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
D0907_01810 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_4
PrmA
Methyltransf_11
Methyltransf_12
TcdA_TcdB_pore
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AXV64101
UniProt:
A0AAD0WBI7
LinkDB
All DBs
Position
complement(383029..384126)
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AA seq
365 aa
AA seq
DB search
MAVIKIDTTQYDAQLSEKEQRITSQFRRFGVNTLEVFSSDPIHYRQRAEFRVWHEGDDLF
HIMFDQQSKEKIRVDEFDPAAPLVGEVMQVMIENLKGCEVLRRKLFQIDYLSSLSGEILV
SLLYHKPLNDEWLIAIKELKAKLSSQFKIDFIGRARKQKEVIGNDYVVERLNVNGKELIY
QQVENSFTQPNAKVNIKMLEWAQALCEPLNNDLLELYCGNGNFSIALAGSFNRVLATEIS
KSSVYSAQYNIAQNKVDNLDIIRMSSEEFTQAMKGERTFSRLDGIDLNGYNCQTILVDPP
RAGMDTLTCDLVANYDNIIYISCNPETLERDLDHLCKTHEVKRFAIFDQFPYTHHIESGV
FLQRK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcggttataaaaattgatacaactcaatatgatgcacaattgagtgagaaagagcag
cgcatcacgtcacagtttaggcgctttggtgtaaacacattagaagtgttcagctctgat
ccaattcactaccgtcaacgtgcagagtttagagtgtggcatgagggcgacgatttattc
cacattatgtttgatcagcaaagcaaagagaaaattcgcgttgatgaatttgatcccgcc
gcgccactcgttggcgaagtgatgcaggtgatgattgaaaatttaaaagggtgtgaggta
cttcgccgcaagttattccagattgattacctctctagcttaagtggtgaaattcttgtt
agtttgctttaccacaaacctttaaacgatgaatggctaattgcgattaaagagcttaaa
gcaaaattaagcagccagtttaaaatcgactttattggtcgtgcacgtaagcaaaaagaa
gtgattgggaacgactatgtcgttgaacgattgaacgtaaatggtaaagaactcatttat
cagcaagtagaaaatagctttactcaaccaaacgcaaaagtgaacattaaaatgctggaa
tgggcacaagcgttgtgtgagccccttaataatgatttgctagagctgtattgtggtaat
ggtaacttttcaattgcactagccggttcatttaaccgagtacttgcgactgagatctca
aagtcatcggtttattctgcacagtacaatattgctcaaaacaaagtcgataatttagat
atcattcgtatgtcgagtgaagagtttacacaagccatgaaaggcgaacgtactttttca
cgtttagacggtattgatctaaacggctataactgccaaacaattttagtcgaccctcct
cgagcggggatggatactcttacctgtgatttggtggcgaactacgacaacattatctat
atctcttgtaatcccgagacattagaacgagatcttgatcacctttgcaaaacacacgaa
gtgaaacgttttgcgatttttgatcaattcccctatacacatcatattgagtctggcgtc
tttttacagcgtaaataa
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