Pseudoalteromonas lipolytica: D0907_02650
Help
Entry
D0907_02650 CDS
T05890
Symbol
rsmH
Name
(GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdj03009
]
D0907_02650 (rsmH)
Enzymes [BR:
pdj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
D0907_02650 (rsmH)
Ribosome biogenesis [BR:
pdj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D0907_02650 (rsmH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_12
FtsJ
Methyltransf_25
Methyltr_RsmB-F
Ubie_methyltran
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AXV64250
UniProt:
A0AAD0RWX8
LinkDB
All DBs
Position
558215..559150
Genome browser
AA seq
311 aa
AA seq
DB search
MTAQFEHVSVLMEETINALDIKPEGIYMDGTFGRGGHSGQILARLNDHGRLQAIDQDPQA
IKAAEKFADDARFSIAHTRFSNLKTVAEDNDLIGKVDGILLDIGVSSPQLDDAERGFSFM
KDGPLDMRMDPTSGRSAAQWLAEAELEDITHVIKTFGEEKFGRRIAHKIIETREHTPITS
TKQLADLVDQAVPVKDKHKHPATRTFQAIRIYINSELEEIQTALQAAVEVLKPGGRLVVI
SFHSLEDRIVKQFIKKQSKGEAIPRGLPLTDAQINKNLTLKAVGKAIKPSKEEIELNPRS
RSSVLRVAQRL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcaatttgaacatgtctctgtactgatggaagaaaccataaatgctttggac
ataaagcccgaaggtatttacatggatggcacatttggtcgcggtggacactcaggacaa
attttagcgcgtctaaatgatcacggtcgcttacaagcaatcgaccaagatccgcaagct
attaaagctgccgaaaaatttgctgatgatgcccgtttttcaattgctcatacccgtttt
tctaatttaaaaacggtggcggaagacaatgacttaattggtaaagtcgatggcatttta
ttagacattggtgtgtcatcacctcaactagacgatgcagaacgcggttttagtttcatg
aaagatggcccgcttgatatgcgcatggacccaaccagtggtcgcagtgctgcacagtgg
ttagccgaagcggaacttgaagacattacccatgtgatcaaaacctttggtgaagaaaaa
tttggtcgtcgtattgctcataaaattattgaaactcgcgagcacacaccgattacgagt
accaaacaattggctgatttagttgatcaagccgtgccagtaaaagataaacataagcac
cctgcaacacgcacctttcaggcgattcgaatttatatcaacagtgagctcgaagaaatt
caaacggcgcttcaagctgctgttgaagtattaaagccgggtggacggctggtggttatt
tcgttccactcactcgaagatcgtattgttaagcagtttattaagaaacagagtaaggga
gaggcgatacccagaggtctgcctttaacagatgcacaaataaataaaaacctgacgtta
aaagcagtgggtaaagccattaagccgagcaaggaagaaattgaattaaatcctcgttcg
cgcagctcggtgctaagggttgcacagaggttgtaa
DBGET
integrated database retrieval system
