Pseudoalteromonas lipolytica: D0907_03095
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Entry
D0907_03095 CDS
T05890
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdj03021
]
D0907_03095 (rpoH)
Transcription machinery [BR:
pdj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D0907_03095 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
IF2_N
HTH_25
Sp-DndD
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AXV64334
UniProt:
A0AAD0RYE8
LinkDB
All DBs
Position
659905..660768
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AA seq
287 aa
AA seq
DB search
MSKDLYAMALTAGQQSASMDGYLQAVSTIPMLDAEHEKQLATRLQEEGDLDAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVANELGVSEKEVREMESRMSG
QDMGFDLTGDDNDDAPTSTYSPVQYLTDGSADLADDIEEQQWQEQSHARLFSALKTLDER
SQDIVSARWLADDKATLQELAEKYNVSAERVRQLEKTAMKKLQTAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttactgcaggtcaacaaagcgcgagtatggac
ggctatcttcaagctgtcagtacgattccaatgcttgatgccgagcatgaaaagcagtta
gcgacacgtcttcaggaagaaggtgatcttgatgctgcgaagcaactcattatgtcgcac
cttcgttttgtagctcacattgcaaaaagctattcagggtatggtttaccgcaagctgat
ttaattcaggaaggtaacatcggtctaatgaaggctgtaaaacgctttgacccgagcgtc
ggcgtacgcttagtttcattcgctgtacattggattaaagcggagattcatgaatacgta
ctaaaaaactggcgtatcgtgaaagttgcaacgacaaaagcgcaacgtaaactattcttc
aatctacgtaaaaacaaaaaacgtttaggttggtttaaccaagccgaggttagcactgtt
gctaacgagctaggggttagtgaaaaagaagtacgtgagatggaatcgcgtatgagtggc
caagatatgggctttgatttaacgggtgacgacaatgacgatgcacctacaagcacctac
tcgccagtacaatatttaactgatggcagtgctgaccttgctgacgatattgaagagcag
caatggcaagaacagtcgcatgcacgtttatttagtgcattaaaaacgcttgatgaacgc
tcgcaagatatcgtaagtgctcgttggttagctgatgataaagcaaccctgcaagagctt
gctgaaaagtataacgtgtcagcagagcgtgttcgccagctagaaaaaacagcgatgaaa
aaactgcaaacagccatgagctaa
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