Pseudoalteromonas lipolytica: D0907_03640
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Entry
D0907_03640 CDS
T05890
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj03030
DNA replication
pdj03430
Mismatch repair
pdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0907_03640
03430 Mismatch repair
D0907_03640
03440 Homologous recombination
D0907_03640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdj03032
]
D0907_03640
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_03640
Enzymes [BR:
pdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0907_03640
DNA replication proteins [BR:
pdj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0907_03640
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0907_03640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AXV64437
UniProt:
A0AAD0RY28
LinkDB
All DBs
Position
781898..782521
Genome browser
AA seq
207 aa
AA seq
DB search
MVKRWLSRYMARKQLLAADAYKERYVVIDMELTGLDPRQHEIVSVAWVMIEDQCIKMSGA
QHIINKDVQSLEQSPIYHGIAKQDIDSGESLEAILAKLHQHVDDCILVFHNATLDWGFLK
QACRKLGLEAKARLILDTFVIEKKRLHQQGHEIGHDDLTLSECRKRYGLPHYSSHHALTD
AMATAELFLAQCHQISRGKALKVGELL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggttaaacgttggctcagtcgttatatggctcgcaaacaattattggcagctgatgcc
tataaagaacgttacgttgtgatagatatggaactaacggggcttgatccccgccaacat
gaaattgtctcggtggcatgggtgatgatagaagaccagtgcattaaaatgagtggggca
cagcacataattaataaagacgtacagagcctagagcaaagccctatttatcacggcatt
gccaagcaagatatcgatagcggtgaaagccttgaagcaattcttgctaagcttcaccaa
cacgttgatgactgtattttagtttttcataacgcgacgcttgattgggggtttttaaaa
caagcgtgccgtaaactaggcttagaagctaaagcgcggttaattcttgatacgttcgtt
attgaaaaaaagcgtctccatcagcaaggccatgaaataggccacgatgacctaacatta
agcgagtgccgtaaacgctatggcttacctcattacagctctcaccatgctttaaccgat
gccatggccaccgccgagctttttttagcgcagtgccatcaaatcagtcggggtaaagcc
ttaaaagtgggggagttgctgtaa
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