Pseudoalteromonas lipolytica: D0907_04020
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Entry
D0907_04020 CDS
T05890
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_04020 (radA)
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D0907_04020 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DnaB_C
Lon_C
AAA_22
AAA
SLFN-g3_helicase
nSTAND3
AAA_14
MMR_HSR1
ABC_tran
NPHP3_N
cobW
AAA_18
AAA_16
Rad51
RecA
PDS5
AAA_19
AAA_11
ATPase_2
Aminotran_3
AAA_30
AAA_24
TsaE
CobU
Zeta_toxin
NACHT
AAA_28
AAA_23
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AXV64510
UniProt:
A0AAD0WBT6
LinkDB
All DBs
Position
877929..879314
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AA seq
461 aa
AA seq
DB search
MAKSAKIEFVCTECGMNYQRWQGQCKCGAWNTLAEFKPSAGQSKQAASRAVVAGYAGGVG
GGSKKINEVETAEAEKRLTDIGELDRVLSGGVTTGSVNIISGDPGAGKTTLLSDLIARMS
KVMPSLYCTAEESLSQFKNRVNRLRLDYNPDELYLLSETSVEAIIEELDKNKIKFAVIDS
IQAVVTEAANGSPGSPSQVKSAAQALTQYCKQNDVTMFIIAHVNKNNEIAGPQTLVHIVD
ALLHIDTNDGQIRTLRANKNRFGDIDTVGIFRMCERGMLSVDNPSEIFLSGSSTESPGSA
ITCIRKGNRNLLLEIQCLTTETEAEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFF
NIVGGLKIDESETCIDLALVTALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKE
AAQHGFTEIFIPYRNYHKSMEGLGAKITPVKTVHELLSLIN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcagcaaaaatcgaatttgtctgcacagagtgcggcatgaactatcagcgc
tggcaaggacagtgtaagtgcggtgcatggaacacgctagcagaatttaagccctcagcc
ggacagtcaaaacaagcggcaagccgtgccgtggttgcaggctacgcaggcggtgttggc
ggcggctcaaaaaaaattaatgaagtcgaaaccgccgaagcagaaaaacgcttaaccgac
attggtgagttagaccgtgtattaagtggcggtgtgaccaccggttccgtaaatattatt
tcgggcgatccaggggctggaaaaacgacattattgtcagatttaattgctcgcatgtcg
aaagtgatgccgtcactttattgtacggcagaagagtcattatcgcagtttaaaaaccgt
gtaaaccgactgcgtttagattataaccctgatgagctttatttactgtcagaaaccagc
gttgaagcaattattgaagagcttgataagaacaagattaagtttgcggtgatcgattca
attcaagcggttgtgacagaagccgctaatggcagcccaggctctccttcacaagttaaa
agtgcagcacaagcactcactcaatattgtaagcaaaatgacgtcaccatgttcattatt
gctcacgtaaataaaaacaacgaaatcgcaggcccgcaaaccttagtgcatattgttgat
gcgctgctgcatattgataccaacgatgggcaaattcgtaccttacgtgccaataaaaac
cgttttggcgatattgataccgtcggtatttttagaatgtgtgagcgcggtatgctcagt
gttgacaacccaagcgaaatatttttatcggggtcaagcaccgaatcgccgggatcggct
attacatgtattcgtaaaggtaatcgtaatttattgttagagattcagtgcttaaccaca
gaaaccgaggctgagtttccgcaacgagtgtgtgttggcttaaatatgaatcgtatcaaa
atgctcacagggattttgcgtaaacacaccaagactaaaatctttcatgacacgtttttt
aatattgtcggtggcctaaaaattgatgagtctgaaacctgtatcgacttagcattagtt
acggcattgttgagtagtttgaatgaatttgttgtgccaagaaccacctgtattatgggc
gaattaagcttaaatggtgacgttaggcccatcgacagtggggtgccgcgagtaaaagaa
gccgctcagcatggtttcactgaaatttttattccatatcgtaactaccataaatcaatg
gaaggattgggcgcaaaaattacacctgttaaaacagtgcatgagttactgtctttaata
aactag
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