Pseudoalteromonas lipolytica: D0907_04065
Help
Entry
D0907_04065 CDS
T05890
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdj03036
]
D0907_04065 (xerD)
Chromosome and associated proteins [BR:
pdj03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
D0907_04065 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
HTH_52
Motif
Other DBs
NCBI-ProteinID:
AXV64519
UniProt:
A0AAD0RXM5
LinkDB
All DBs
Position
885573..886508
Genome browser
AA seq
311 aa
AA seq
DB search
MTIRVAENNFTAEKVAITSNSAEHLELFLDILYLEQGVSENTLMAYRSDLDKFCQFLKDK
DLLAVSSEDIEAYLAYRVDLGLKSRSTARSISALKRFYQYFVREKAIADSPMLNIAQPKA
GQSLPKTLSEAEVEALLAAPNIEEPMGLRDKAMLELLYATGLRVTELVGLRMEQINLRQA
VVFVKGKGNKERLVPLGEEAMYWLERFLKVGRAQMIKHATDFVFPSKRGIGMTRQTFWHR
IKHYAILASVESPLSPHTLRHAFATHLLNHGADLRVVQMMLGHSDLSTTQIYTHVANERL
KSVHEQHHPRA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacgcgtggctgaaaataatttcacagctgaaaaagtagcaataacgtcaaac
agtgccgaacatttagagttgtttttagatattttgtaccttgagcaaggggtcagtgaa
aacacattgatggcatatcgcagcgatcttgataagttttgccagtttttaaaagacaaa
gatctactggctgtcagcagtgaagatattgaagcttacttggcataccgagttgattta
gggcttaaatcacgcagcactgcgcgcagcatcagtgcgcttaaacgtttttaccaatac
tttgtacgtgaaaaagccattgctgattcgccaatgctgaatattgcacagccaaaagca
gggcagtcattacccaaaactctctctgaggcagaggttgaagcgctactcgctgcgcct
aatattgaagagcctatggggctgcgcgataaagcaatgttggagcttttatacgcaacg
ggtctgcgcgttactgagctggtagggcttaggatggagcaaattaacttgcgccaagca
gttgtgtttgtcaaaggtaagggaaataaagagcgtttagtgccgcttggtgaagaagcg
atgtattggcttgagcgctttttaaaagttggccgcgcgcagatgatcaagcatgcgact
gactttgtgttcccatctaagagagggattggcatgacgcgacaaactttttggcatcgt
atcaaacactatgctattttggcatcagttgaatcgccgttatcaccgcatacgcttcga
catgcgtttgcaacgcatttgctgaatcatggggctgatcttcgtgtcgtgcaaatgatg
ttaggtcacagtgacttatcaacaacacagatttatacccatgtagcgaatgagagattg
aagtcggtacacgagcaacatcatccacgtgcttag
DBGET
integrated database retrieval system
