Pseudoalteromonas lipolytica: D0907_05245
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Entry
D0907_05245 CDS
T05890
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_05245
Enzymes [BR:
pdj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
D0907_05245
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
D0907_05245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF4937
Phage_pb10_N
Motif
Other DBs
NCBI-ProteinID:
AXV64733
UniProt:
A0AAD0WBS2
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All DBs
Position
complement(1154453..1156012)
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AA seq
519 aa
AA seq
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MVHYSTLRFIFGDQLNASHSWYKDEDQHTTLYVIAELKQETDYVKHHTQKIAAFFLAMEH
FAKALKSAGFNVLHLTLDDTEDDESLPALLTRLAKHYQCKRIEYQYPDEYRLKQQLQAFS
ENSECAITAYDTEHFLLPFNDICQHFKKDKHVKMEFFYRAMRKRFNILMDENNEPVGGKW
NFDQQNRNKLKQHDLNAIPEPLCFGHDVKDILSRIKKHNITTFGECNHSILWPTTRYEAK
QLLDFFCDHLLVHFGQFQDAMTCQSEHQWSLYHSRLSFALNTKMLHPMQVIKRVIEAFEQ
QQQKIDIAQVEGFIRQILGWREYVRGIYWQNMPDYANKNALDAKRALPDYFWHANTKMKC
MHHAIKQSLDTAYAHHIQRLMITGNFCLLTAINPNEVDAWYLGIYIDAIEWVEMPNTRGM
SQFADGGLIATKPYAASGNYINKMSDYCKDCHYNVKEKATDDACPFNSLYWNFMLEHEQL
LSKNPRIGMIYNTWYKQDESQQQATLKRAKWCVDNLEKL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
attgtgcattactctactttgcgatttatttttggcgatcaactcaatgctagccacagc
tggtataaagacgaagaccagcacaccactctttatgtcatcgctgagctaaaacaagaa
accgattacgtaaaacatcatacacaaaaaattgccgcctttttcttagcaatggaacac
tttgcaaaggcgctaaaaagcgcggggtttaatgtgctacatcttaccttagatgacaca
gaagatgacgaatcattacccgcccttcttacccgtttagcgaaacactaccaatgtaaa
cgcattgaataccagtatcccgatgaataccgactcaaacagcaattacaggcattctca
gaaaacagtgagtgtgcgattaccgcatacgacacagagcattttttacttccctttaat
gatatatgccaacactttaaaaaagacaagcatgtaaaaatggaattcttttatcgcgca
atgcgtaaacgattcaatatattaatggacgaaaacaatgaaccggtcggaggcaagtgg
aactttgatcaacaaaatagaaacaagttaaaacaacatgatctcaacgcaattcctgaa
ccactgtgctttgggcacgatgttaaggacattctttcacgcataaaaaaacataacata
acgacatttggagagtgcaatcattcgatactttggccaacaacacgttatgaagcaaag
cagcttcttgattttttttgcgatcatttgttagttcactttgggcaatttcaagatgcc
atgacctgtcaatctgagcaccaatggtcgttatatcacagccgcttgtcgtttgctctc
aacactaaaatgctgcacccaatgcaggttattaagcgcgtgattgaggcttttgaacaa
caacagcaaaaaattgatattgcccaagttgaagggttcattagacaaattctgggctgg
cgcgaatatgtgcgtggtatttactggcaaaatatgcctgactacgccaacaaaaatgcc
cttgacgcaaagcgtgccctgcccgactatttttggcacgcaaacactaaaatgaaatgt
atgcaccatgcaattaagcaaagtttagacaccgcctatgctcatcatattcaacgtttg
atgataacgggtaacttttgtttgcttacagccataaacccaaatgaagtcgatgcttgg
tatttaggtatttatattgatgctatcgaatgggttgaaatgcccaacactcgcggcatg
agtcaatttgcagacggcggcttaattgccactaaaccgtatgccgcaagcggtaattac
attaataaaatgagtgactattgtaaggattgccattacaacgtgaaagaaaaagccacc
gatgatgcgtgccctttcaatagtttatattggaacttcatgctagagcacgaacaattg
cttagcaaaaatccgcgtataggcatgatttataacacttggtataaacaagacgaatcg
cagcaacaagccactcttaaacgcgcaaagtggtgcgtcgataatttagagaaattataa
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