Pseudoalteromonas lipolytica: D0907_05620
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Entry
D0907_05620 CDS
T05890
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pdj03029
]
D0907_05620 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdj02000
]
D0907_05620 (bamA)
Mitochondrial biogenesis [BR:
pdj03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
D0907_05620 (bamA)
Transporters [BR:
pdj02000
]
Other transporters
Pores ion channels [TC:
1
]
D0907_05620 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
AXV64799
UniProt:
A0AAD0RZI9
LinkDB
All DBs
Position
1231996..1234467
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AA seq
823 aa
AA seq
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MAIKKHLAVSSLLGASFAALGQNSFIVEDLKVEGLQRVALGAALTHIPINVGDNIDEYTI
SRTIKALYRSGHFDNIKALRDGNNVIFRVTERPTISLIEFDGNKDIKDEQLNESLDQQDI
RTGEPLDKTVLDNIEKGLVEFFHSIGKYNAKVEVSITKLPRNRVKLLFKFDEGDAASIRQ
INLVGNELFSDEELLKLAESQQDLPWWKFMSSDRYQKQTIEGDLEKIRSYYLDRGYLRFN
IDSTQVSVSPERDSVYVTANITEGVKYTVKGFDFIGDLLGREELIKSVIPLKTGELYNGS
VVTSSEEFIKSYLARFGYANAEVRTIPEIDDEKKEVQLTLSVNPGKRVYVRRIIVGGNQN
TADEVVRREMTQLEGAWLSNQNLERSKLQIQRLPYMESVDFNVVPVPGVDDQVDVDFTVK
EQSAGSFNAGLAYGSYLGLQFNIGVSESNFLGTGNQIGFNINTSRGSERISLSYTDPYFT
PDGVSQGSSIFYSNYDASKFSLIDYKSKSYGIGTNIGFPIDAVNRINFGFRWIQEELSDI
AEYEQTRVMRETFLDPENPDAGFDFTKFELSAGWSRVTVNRGLFPTAGSRQSLNLTGTTP
NSDLTYFKLNYDSRFYWPISNDHRWVFSTRAALAYGNGYGTTNGYDQTLPFQEFFRITEM
ELRGFDRNTILPRAVSRQPQSIPGTPLPDGTTTGSIGGASEFDVLIPQGRIGGNAKAVAG
MELIVPTPFLDEENTSSVRTSFFVDAANVWDTEFNIDRYQNLLPDQRAKLEDYSDPMRFR
VSTGLSLQWISPMGPMLISFAYPLQKEEDDDTKTISFNISNTF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggctataaaaaaacatttggcagtttcaagtttattaggtgcaagctttgcagcccta
ggccaaaactcctttattgtagaagatttaaaagttgaaggtttacaacgtgttgctcta
ggtgcagcgctaacccatattccgatcaacgtgggcgataatattgatgagtacacaatt
tcaagaaccataaaggctctctatcgctctggtcactttgacaatattaaagcgttacgt
gacggtaataacgtcatttttcgagtaactgagcgccctacgattagcctcattgagttt
gatggtaacaaagacatcaaagatgagcagttaaacgagtcgctagaccagcaagatatt
cgtactggtgagccgcttgataaaacggtacttgataacattgaaaaaggcttagttgag
tttttccacagtattggtaaatacaatgcaaaagtggaagttagcatcacaaagctgcca
cgtaaccgtgtaaaattattatttaagtttgatgaaggtgacgccgcgtcaattcgtcaa
ataaacctcgtgggtaacgaattattctctgacgaagaattgctaaaacttgctgagtca
caacaagacttgccatggtggaagtttatgtcgagtgaccgttatcaaaagcaaactatc
gaaggcgatttagagaaaattcgtagttactacttagaccgtggttacctgcgttttaat
atcgattcaacacaagtatcggttagccctgagcgcgattctgtttatgtaaccgctaat
attaccgaaggtgtaaaatacaccgtaaagggttttgacttcatcggtgatttattaggt
cgagaagagctaattaagagtgttataccgctaaaaactggtgagctttataatggttca
gtggttacgtcatctgaagaatttatcaaaagctacttagcacgttttggctatgcaaac
gcagaagtgcgcaccattcctgagattgatgatgaaaagaaagaagtgcaactgacactg
tctgttaatccaggtaagcgtgtgtatgttcgccgaatcattgttggtggtaaccaaaat
actgcggatgaagttgttcgtcgtgagatgacacagcttgaaggtgcatggctttcaaat
caaaatcttgagcgttcaaaattacaaattcaacgtcttccatacatggaaagtgttgat
tttaatgtggtgccagttcccggtgttgacgaccaagttgatgtagactttacggttaaa
gaacaatctgctggtagctttaatgcgggccttgcgtatggttcatacttgggtttgcaa
tttaatattggtgtgagtgaatcaaacttcttaggcaccggtaaccaaattggctttaac
attaatacctcacgtggttctgagcgtatcagcttgtcgtataccgacccttactttacg
ccggatggtgtatcgcaaggaagtagtatcttctatagcaactatgatgcgagcaaattt
agtcttatcgactataaatcgaagagttatggtattggtaccaacattggtttcccaatt
gatgcggtgaaccgtattaactttggtttccgttggattcaagaagaactgtctgatatt
gcagaatatgagcaaacacgtgtaatgcgtgaaaccttcttagacccagaaaatccagat
gcaggtttcgactttaccaagtttgagctgagtgcagggtggtcgcgtgttactgtaaac
cgtggtttattcccaacagcgggttcgcgtcagtcacttaacttaactggtacaacgccg
aattcagatttaacctactttaagttaaattatgattcacgtttttactggccaatcagt
aatgaccatcgttgggtattctcaacgcgtgcagcccttgcttatggtaatggttatggc
acgacaaatggttatgaccaaacgctgcctttccaagagtttttccgtatcaccgagatg
gaactgcgtggttttgaccgtaatacaattctaccgcgcgcggtgtctcgtcagccacaa
agcattccgggcacaccactgccagatggcacaacaacaggcagtattggtggcgcatca
gaatttgatgtattaataccacaaggccgaattggtggtaacgccaaagcagttgcaggt
atggagcttattgttcctacgcctttcttagatgaagaaaacaccagctctgtacgtaca
agcttcttcgtggatgctgcgaacgtatgggatacagagtttaacattgaccgttatcaa
aacttgttacctgatcaacgcgctaaactagaggattattcagatcctatgcgctttagg
gtgtcaaccggtctatcactacaatggatctctccaatgggtccaatgctgatcagtttt
gcgtatccattgcaaaaagaagaagatgacgatacgaagaccatcagctttaatattagt
aatacattctaa
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