Pseudoalteromonas lipolytica: D0907_05685
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Entry
D0907_05685 CDS
T05890
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj03030
DNA replication
pdj03430
Mismatch repair
pdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D0907_05685
03430 Mismatch repair
D0907_05685
03440 Homologous recombination
D0907_05685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdj03032
]
D0907_05685
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_05685
Enzymes [BR:
pdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D0907_05685
DNA replication proteins [BR:
pdj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D0907_05685
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D0907_05685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AXV64812
UniProt:
A0AAD0RYW6
LinkDB
All DBs
Position
1246300..1249791
Genome browser
AA seq
1163 aa
AA seq
DB search
MPAPQFVHLRVHSDFSMVDGLAKTKPIVAKAEELQMPALAITDQMNLCGLVRFYGAAHGA
GIKPIVGADFWLRSPEFEDEPCRITILAKDNEGYKNLTLLISKAYQRGHVFHRPVIDREW
LVGLKNGLIILSGAKDGDLGKALLKGNAGLIESVVSFYKQHFSDHYYIELIRTERPFEED
YLHLAVELASQEQLPVVATNEVVFLKPENFEAHEIRVAIHDGYTLEDKRRPKRFSDQQYL
KTAEQMAELFSDIPEALENTVEIAKRCNVTVQLGTYFLPDYPTGSLKIDEFLVKVSKDGL
EERLQFLFPDEEERKEKRVEYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSA
LYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPGDPGMTLAKAFDVEPR
LQEAYDGDEEVKELIDMCRILEGCTRNAGKHAGGVVISPTTITDFAALYCDDEGKFPVTQ
FDKNDVETAGLVKFDFLGLRTLTILQWALDMTNERLAREGKDPVDINAIPLDDKPSIDLL
LRAETTAVFQLESRGMKDLIRRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLQPILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSTFEEGAEKNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYPA
EFMAAVMSADMDNTDKIVTLVDECENMKLTLLPPDVNAGEYKFTVNLKGQIVYGIGAIKG
VGEAPVEAILEARKEGGPFKDLFDFCARVDLKRLNKRVVEKLIYAGALDQLGPDKTQPGR
ATLLASLKDAMRAADQHHKAESLGQADLFGLLATEPDEVEQAFIKAPDLTDNEWLDGEKE
TLGLYLTGHPINQYRKELKYYTSGRLVDLQPTNRDVQSTAAGLVIAARTLINKKGNRWGL
VTLDDKSARIDVRLFPEQFEMYQDMLQVNNILVISGQVSFDNFSGGITMTARDICTIAQA
REKRIKAIKMTLNMVQIEANFFDNLQKVLEPYKFGTCPIKVFYQRPDALAEITLGTEWCV
TPSDDLIHKLSLMAAQDVELEFN
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgccgcaatttgttcatttacgtgttcattctgatttctcaatggtggatggc
ctcgcaaaaacaaaaccaatcgttgccaaagcagaagagctacaaatgccagcgctggcc
ataacagaccagatgaacttatgtggtttggtgcgtttttatggggctgcacatggcgct
ggaattaagccaattgtgggagctgatttttggttacgaagcccagaattcgaagatgaa
ccatgccgaataactattttagccaaagataacgaaggctataaaaacctcacgttatta
atctctaaagcgtatcaacgcgggcatgtttttcatcgtcccgtgattgaccgtgaatgg
ctggtggggctcaaaaatggcctcataattttatcaggcgcaaaagatggcgatttaggc
aaagcattacttaaaggcaatgccggcctgattgagtcggtggtgagtttctataagcaa
cactttagtgaccattattatattgagcttattcggactgagcgcccatttgaagaagat
taccttcatttagcggtagaattagcaagccaagaacaactgcccgtggtggccactaac
gaggtggtgtttttaaaacctgaaaacttcgaagcccacgaaattcgtgttgcaattcat
gatggttacacccttgaagataagcgccgaccaaaacgtttttctgatcagcaataccta
aaaacagctgagcaaatggctgagctctttagtgatattcctgaagcgctcgaaaacacc
gttgaaattgcaaaacgctgtaacgtaaccgtacagttgggcacctatttcttacccgat
tacccaacgggctcgctcaaaatcgatgaattcttagttaaagtatcgaaagatggtctt
gaagagcgattgcagtttttattccccgatgaagaagagcgaaaagaaaagcgcgtagaa
tacgatgagcgcttacaaatcgagctcgatgtaattaaccaaatggggttcccgggttac
ttcttaatcgtaatggagttcatccagtggagtaaggataacaatattccagtgggaccg
ggacgtggctcgggtgcgggctcgttggttgcatatgcacttaaaattaccgacttagat
ccgcttgaatttgacttactattcgaacgttttttgaaccctgaacgtgtatccatgccc
gactttgacgttgacttctgcatggacagacgtgatgaagtgattgatcacgtatcggca
ttgtatggccgcgacgcggtatcgcaaattatcacctttgggaccatggctgcaaaagcg
gttattcgtgatgtggggcgtgtacttggccacccttatgggtttgtcgatcgcatatca
aaactagtccctggcgaccccggtatgacgcttgcgaaagcgtttgatgtagaaccgcgt
ttacaagaagcctatgacggtgacgaagaagtaaaagagcttatcgacatgtgtcgcatt
cttgaagggtgtacacgtaatgccggtaaacacgcagggggggtggtaatttcacccacc
acgatcaccgattttgctgcactttattgcgacgatgaaggcaagttcccggtaactcaa
tttgacaaaaatgacgttgaaaccgcaggcttggttaagttcgacttcttaggtttaaga
acattaaccatcttgcaatgggcgctcgacatgaccaacgagcgtttagcgcgcgaaggt
aaagaccccgttgatatcaatgctatcccgcttgatgataaacccagcattgacttattg
ctccgcgctgagacgaccgcggttttccagctagaatcgcgcggcatgaaagaccttatt
cgtcgtctaaaacccgactgctttgaggatatgattgcactcgtggcattattccgaccg
ggtccactgcaatcaggcatggtagataactttatcgaccgtaagcatgggcgtgaagaa
atatcgtaccccgatgtacaatggcaacatgaaagcttacagccaatattagagccgacc
tacggcatcatcctgtatcaagagcaggtaatgcagattgcgcaggtactggcaggctat
acccttggtggcgcagacatgcttcgccgtgcaatgggtaagaaaaaacctgaagaaatg
gccaagcagcgttcaaccttcgaagaaggtgcagaaaagaacggtattgacggcgaacta
gcgataaaaatcttcgacttggtcgaaaagttcgcaggttacggctttaacaaatctcac
tccgctgcttatgcattggtgtcgtatcaaactctgtggatgaaaacgcattatccggcc
gagtttatggcggccgtaatgtcggctgatatggataacaccgataaaattgttaccttg
gtcgacgaatgtgaaaacatgaagttaaccttgctaccgcctgatgtaaatgcgggtgag
tacaagtttacggttaacttaaaaggccaaattgtttacggtattggtgcgattaaaggg
gtgggtgaagccccagtagaagccattttagaagcgcgtaaagaaggcggcccgtttaaa
gacttatttgatttttgcgctcgcgttgatttaaaacgtttaaataaacgcgtagtagaa
aaacttatttatgcgggggcgctggatcagttaggccctgataaaacacagcctggtcgc
gcaacattgttagctagtttaaaagatgccatgcgagcggcagaccagcaccataaagcg
gagtcgcttggtcaggctgatttatttggtttattagccacagagccagacgaagttgaa
caagcctttattaaagccccagaccttacggataacgaatggttagacggtgaaaaagaa
acgttagggctgtatttaacgggccacccgattaatcagtaccgaaaagagcttaaatat
tatacttcggggcgtttggttgatttgcagccaacgaatcgcgatgtgcagtcaaccgct
gcaggcttagtcattgcggcgcgtacgctcataaataaaaagggaaatcgttggggtctt
gtaactttagatgacaagagtgcccgtattgatgtacgcttattcccagaacagtttgaa
atgtaccaagatatgctgcaagttaacaatatcttggtaatatctggacaggtcagcttt
gataacttctccggtggcattacaatgaccgccagagacatatgcaccattgctcaagcg
cgagaaaagcgtataaaagcgattaaaatgacgctgaatatggtgcagatcgaggcgaac
ttcttcgataatttacaaaaagtgcttgaaccttataagtttggcacgtgtcctattaaa
gtattctatcaacgtcctgatgcgttggctgagattacgttaggaaccgaatggtgtgtt
acgcctagtgatgacttaattcacaagttatcactgatggcggcgcaagatgtagaacta
gaatttaattaa
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