KEGG   Pseudoalteromonas lipolytica: D0907_06355
Entry
D0907_06355       CDS       T05890                                 
Name
(GenBank) H-NS histone family protein
  KO
K03746  DNA-binding protein H-NS
Organism
pdj  Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:pdj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdj03036]
    D0907_06355
   03400 DNA repair and recombination proteins [BR:pdj03400]
    D0907_06355
Chromosome and associated proteins [BR:pdj03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    D0907_06355
DNA repair and recombination proteins [BR:pdj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      D0907_06355
SSDB
Motif
Pfam: Histone_HNS Histone_HNS_N EcoR124_C DUF4355 GIDA_C_1st Phi6_P8 ThiS EcoEI_R_C Mst1_SARAH FF_PRPF40A HTH_57 DUF7883 VIT1
Other DBs
NCBI-ProteinID: AXV64920
UniProt: A0AAD0RYF3
LinkDB
Position
1394188..1394493
AA seq 101 aa
MKEIRSFVKSASLTELEKAKQLIDSAIEKYTQQQEAKKEVLDLLKEKGLTLEDLQDVVGT
DKRTKVKPKYRIEYNGEIIEWTGRGKRPKAFQGVDLTKHLA
NT seq 306 nt   +upstreamnt  +downstreamnt
atgaaagaaatccgatcttttgtcaaatctgcgtctttaactgaacttgaaaaagcaaaa
cagttaattgattcagctatcgagaaatatactcaacagcaagaagctaaaaaagaagta
ctcgatctgctaaaagaaaaaggacttacattagaagatttacaagatgtagtaggcaca
gataagcgtacgaaagtaaaacctaaataccgcatcgaatacaatggtgaaattattgag
tggacaggccgtggtaaacgtcctaaagcattccaaggtgttgacttaactaagcacctc
gcttaa

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