KEGG   Pseudoalteromonas lipolytica: D0907_06360
Entry
D0907_06360       CDS       T05890                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K19789  DNA repair protein RadD
Organism
pdj  Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:pdj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdj03400]
    D0907_06360
DNA repair and recombination proteins [BR:pdj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     D0907_06360
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 AAA_30 ERCC3_RAD25_C AAA AAA_22 AAA_16 T1R_D3-like SLFN-g3_helicase DZR Zn_Ribbon_1 DUF7577
Other DBs
NCBI-ProteinID: AXV64921
UniProt: A0AAD0RYV4
LinkDB
Position
1394561..1396309
AA seq 582 aa
MKYVLRPYQQEAVQRTVSHFKQSDEAALIVLPTGAGKSLVIAELARIAKQKILVLAHVKE
LVEQNAQKYISFGFEASIFSAGLKQKSLKEQVTFASVQSLARNTAQLSDTYSLLIIDECH
RVSGDDQSQYGQVISSLKKQNPRLKVLGLTATPFRMGMGWVYHHHYHGFVRGDKDAPFKK
CIFELPLRYMIKHGYLTPPHEVDAAISHYDFSSLPCDSFGRYSAENMNALLKDNTRATKA
IIEQVIDYSEHRHGVMIFAATVMHAKEIVGYLPTDNTALITGDTDNNERDTIINQFKAKK
LKFLVNVSVLTTGFDAPHVDFIAILRPTESVSLYQQIVGRGLRLSEGKKECLVIDYAGNG
FDLFYPEVGSKKAQSDNEPVQVLCPGCGFANIFWGKTDAAGNVIEHFGRRCQGLLDDDDG
TQIQCDYRFRFKECEQCGEQNDIAARQCQACSAMMTDPDDKLREALNLKDALVLRCSGLS
AQLIANGLLKISYFDEDGASCDEVFNLSNDTGRFIFNKQFGRRAQGNSAPITWKTAEQVI
EQQHVLVAPDFVIARKNKKYGWKVAQKLFDYQGNYRKANQLK
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgaaatacgtacttagaccttatcagcaagaggccgtacagcgaacggttagccacttt
aagcaatcggacgaggcggcactgattgtattaccaacaggcgcgggcaaaagtttagtg
attgctgaattagcacgtattgctaaacagaaaattttagtcttagcgcatgttaaagag
ctcgtagagcaaaacgcacaaaagtacatcagctttggttttgaagcgagtatcttctct
gcagggcttaaacaaaaatcgcttaaagaacaggttacgtttgcaagtgtgcagtcacta
gcgcgcaatacggcgcaacttagtgatacgtattcattgctcattattgatgagtgtcat
cgcgtcagtggggatgatcaaagtcagtatggtcaagtgatatccagccttaaaaaacag
aacccccggctaaaagtattggggttaaccgcgactccttttcgtatgggaatggggtgg
gtttatcatcatcattatcatggctttgtaaggggagataaagacgcaccctttaaaaag
tgtatttttgagttaccgcttcgttacatgattaaacatggctatttaacgccgcctcat
gaagtagacgcagccataagtcattatgatttttcatctttaccctgcgattcatttgga
cgctatagtgctgaaaatatgaatgcgctcctcaaagataatacccgcgcaacgaaggcg
attattgagcaggttattgactacagtgagcatcggcacggcgtcatgatttttgcggca
acagtcatgcatgccaaagaaatcgtcggctacttgccaactgacaataccgcattaatt
actggtgatacagataacaacgagcgcgacactatcatcaatcaatttaaagcgaaaaag
ttgaaatttttggtcaatgtgtctgtactcaccaccggatttgatgcgccgcatgtcgat
tttattgccattttgcgtccaaccgagtcagtcagtttatatcagcaaattgttggcagg
gggcttagattaagtgaagggaaaaaagagtgcttagtgattgattacgcaggcaatggc
tttgacttattttacccagaggtgggcagtaaaaaagcccaaagtgacaacgaacctgtg
caagtactgtgtcctggttgtggctttgcgaatattttttggggaaaaacagatgccgca
ggcaatgtcattgagcactttgggcgtcgctgccaaggtcttctagacgatgatgatggc
acgcaaatacagtgcgactaccgttttaggtttaaagaatgtgagcagtgcggtgagcaa
aatgatatagcagcgaggcaatgccaagcttgctcagccatgatgacagaccccgatgat
aagttgcgtgaagcccttaatttaaaagatgcgttggtgcttcgctgtagtggtttatcg
gcacaacttatcgcaaatgggctgttgaaaattagctattttgatgaggatggtgccagt
tgcgacgaagtttttaatcttagcaacgacacaggccgttttatctttaacaagcaattt
ggtcggcgagctcaagggaatagtgccccgattacctggaaaacagcagaacaggttatt
gaacaacaacatgtattggtcgcgccagattttgttattgcccgaaagaacaaaaagtat
ggttggaaagttgcccagaaactatttgattatcagggtaattatagaaaagccaatcaa
ttaaagtaa

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