Pseudoalteromonas lipolytica: D0907_07755
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Entry
D0907_07755 CDS
T05890
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdj03032
]
D0907_07755 (gyrA)
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_07755 (gyrA)
Enzymes [BR:
pdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D0907_07755 (gyrA)
DNA replication proteins [BR:
pdj03032
]
Prokaryotic type
DNA Topoisomerases
D0907_07755 (gyrA)
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D0907_07755 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AXV65163
UniProt:
A0AAD0RYY3
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Position
1708288..1710984
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AA seq
898 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELNNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDYVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLALIQNPDMTIADLIEYIPGPDFPTAAIINGKKGIEQAYLTGRGKV
YIRARAEIEVDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALDNNQPKCFNLKEMLEAFIIHRRE
VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIELIRKSPTPAEAKAALTARSWELGTV
KAMLEKAGEENVARPDWLAPELGIRDGEYYLSEQQAQAILDLRLHKLTGLEHEKILDEYQ
TLLDLIAELLYILSTPDRLMEVIRDELVEIKEQYGDERRTEISAAAHDISLEDLINEEDV
VVTLSHEGYVKYQPLSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPVREYEEDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDITDGTNEIMLFTDAGKVVRFKEAEESTVVDENG
NPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMADDQRVVSLIVPKTDGAILTVTENGYGK
RTALADYPSKSRATQGVVSIKVSERNGAVVGAVQVDENDEIMIISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVDELEAIEGEGVEVVDTHTEETVDNPPSE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccaatgaaattctgccagtcaatattgaagatgaattaaaaaactcc
taccttgattacgcaatgagcgtaattgtaggacgtgcattgccagacgtacgtgatggt
ctaaaacctgttcaccgtcgtgttttattcgcaatgaacgaactcaataatgattggaat
aagccttacaaaaaatcagcacgtgttgttggtgatgtaatcggtaagtaccacccacat
ggcgacagcgcggtatatgacaccatcgtacgtatggcgcagcctttctcattacgctat
atgcttgttgatggccaaggtaactttggttcagttgacggtgactctgcggcagcaatg
cgttatacggaagtccgtatggcaaaaatgtcacatgagctattagccgacctcgaaaaa
gaaacggttgattacgtacctaactatgatggtacggagcaaattcctgacgtattaccg
acgaaagtacctaacttattagtgaatggttcatcgggtattgcggttggtatggcgacg
aacattccgccacataacttaactgaagttattaatgggtgtttggcactgatccaaaac
ccagatatgacaattgctgatctgattgaatatatcccaggtccagatttccctacagcc
gcgatcattaatggtaagaaaggcatagagcaagcttacctaacgggtcgtggtaaagtg
tacatccgcgcacgcgcagaaattgaagtagacgaaaaaacgggtcgtgaaacgatcatc
gtccacgaaattccgtaccaagttaacaaagcacgcttgattgaaaaaatcgctgaactt
gttaaagacaaaaaaattgaaggcattagcgcactccgtgatgaatcagataaagacggt
atgcgtatcgttatcgagattaaacgtggtgatgtaggtgaagttattctgaataacctt
tatgcacaaacacagttacaaaccgtgtttggtatgaatatggttgcacttgataacaac
cagcctaagtgtttcaacttaaaagaaatgcttgaagcatttatcattcaccgccgcgaa
gtagtcacccgtcgtacggtatttgatttacgcaaagcccgtgaccgtgcccatacgctt
gaaggcttagcgattgcccttgcgaatatcgacccaatcattgagttaattcgtaaatca
cctacgcctgctgaagcaaaagcagctttaacagcaaggtcttgggaactaggcactgtt
aaagccatgcttgaaaaagccggtgaagaaaatgtagcgcgtcctgattggctagcacca
gagctaggtattcgtgatggtgagtactatttatctgagcaacaagcacaggcgatcctt
gacctacgtttacacaaactaacgggtcttgagcatgagaagatcttagacgagtaccaa
acactactcgatcttattgctgaactactttatatcctttcaaccccagatcgccttatg
gaagtaatccgcgacgaactagttgaaattaaagaacaatatggtgacgagcgtcgtaca
gaaatcagtgcagcagctcacgatatcagccttgaagacttaattaatgaagaagacgtt
gtcgtaacgctttctcatgaagggtatgtgaagtatcagccattatcagactacgaagca
caacgtcgtggtggtaaaggtaaatcagcaacgaagatgaaagatgaagatttcattgaa
cgtctccttgttgcaaatacacacgatacgattctgtgtttctcgactgctggtcgttta
tactggctgaaagtataccaattaccacttgccagccgtgcagcgcgtggtaagccaatt
gtgaacttactgccacttgaagctgacgaacgtatcactgcaattctacctgtacgtgag
tacgaagaagataaatacatcttcatggctacagcatttggtacagttaagaaaacacca
ttaacggcttatagccgtcaacgtgcaagcggtatcattgcggtcaacctaaatgaaggc
gatagcctaattggtgttgatatcactgatggtacaaacgaaatcatgctattcacagac
gcaggcaaggtagtacgctttaaagaagcggaagagtcgaccgtcgttgatgaaaatggc
aatccggtacttgatgaagagggtaaccctgaaatccgcttcaaaggtgtacgcccaatg
ggtcgtactgcaaccggtgtgcgtggtattaagatggcagacgaccaacgcgttgtgtcg
ttaattgtgcctaagacagacggtgcaatcctcaccgtgactgaaaatggttatggtaag
cgtacagcacttgccgattacccatcgaagagccgtgcaacacaaggtgttgtatcaatc
aaagtaagcgagcgtaatggcgcagtggttggtgcagtacaagttgatgaaaacgacgaa
atcatgattatctctaatcgtggtacgcttgtacgtactcgtgttaatgaggtttctacg
gttggtcgtaatacgcagggcgttattttgatacgaactattgacgaagagcaagtagtt
ggtttacaacgtatcgaagaaatcgaagttgatgagcttgaagccatcgaaggcgagggc
gttgaagtagtcgatacacatactgaagaaacggttgataacccaccttcagagtaa
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