Pseudoalteromonas lipolytica: D0907_07940
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Entry
D0907_07940 CDS
T05890
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0907_07940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdj02000
]
D0907_07940
Transporters [BR:
pdj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
D0907_07940
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AXV65198
UniProt:
A0AAD0WC92
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All DBs
Position
1749638..1750906
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AA seq
422 aa
AA seq
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MANLKDRRCFLKKMGVGVAASTLAFKAPYVFAKNTVTLRVMGTHVTLQEELRQRAMRELG
INIEFTPMGSAAVLQKAAADPSSFDLYEQWSDSINILWQAGAIQPLDIDRLIYWNEINPL
TKTGRVIPEAKIGAGDSPNKLLYVQPDGRLGTTPSKKISYMPYVHNVDSFGYNTQFIEQG
IPYETESWAWLLDEKNKGKVGLVNAPTIGIFDAALAVQAQGLMSFNDLGNMSITEIDQLF
KILLEKKRQGHFAGFWTSVPQSIDFMKTNRVTIQSMFSPGVSACRGQGIPVVYASPKEGY
RAWHGVMCLSANTQGHVKDAAYDYMNWWLSGYPGAFIARQGYYISNPERSQPLMSIPEWN
YWYQGKEAVTDLTGTDGKISVQAGQVRDGGSYIKRFSNIAVWNTVMPNYDYSLDKWFELL
NS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggctaacttaaaagaccgtcgatgttttctaaaaaaaatgggtgtgggagtcgctgct
tcaacactggcatttaaagcaccgtatgtttttgcaaaaaacactgtcactttgagagtg
atgggcacacatgtcaccttgcaagaagagttacgtcaacgagcaatgcgtgagcttggc
attaatatcgagtttactccaatgggcagtgctgctgttttacaaaaggcggcagcggat
ccaagttcttttgatttgtacgaacagtggtctgattcaattaatattttgtggcaagct
ggggctatccaaccattagatattgataggcttatttattggaacgaaattaacccacta
actaaaactgggcgtgtaatacctgaagcaaaaataggggcgggggattcacccaataag
cttttgtatgttcagcctgatggtcgtctcggtacgacgcctagcaaaaaaatcagttat
atgccgtatgttcacaatgttgattcctttggctataacacgcaatttattgagcaaggt
attccctatgaaaccgaatcgtgggcatggttgctcgacgagaaaaataaagggaaagta
ggcttagttaatgcgcccaccataggtatttttgacgccgcacttgctgttcaggcccaa
gggctgatgagtttcaatgacttaggaaatatgagtattacagaaattgatcagctgttt
aaaattttgctcgagaaaaaaaggcagggtcacttcgctggattttggacatcggttcca
cagtcgatagactttatgaaaactaaccgtgtgactattcaaagtatgttttcaccggga
gtaagtgcatgcagaggacaaggtatccctgttgtgtatgcttcacccaaagaaggttat
cgtgcttggcatggggttatgtgtttatcggccaatacgcaagggcatgtaaaagatgca
gcgtacgattacatgaactggtggttgtcaggctatcccggtgcatttatagcgcgtcag
ggctattacatttctaacccagaacgaagtcagcctcttatgtctataccagagtggaat
tactggtatcaaggtaaagaagcggtgacagacttaacaggcactgatggaaaaatctct
gttcaagctgggcaagtaagggatggaggcagctacattaagcgcttttctaatatcgcg
gtttggaatacggtcatgccaaattatgattacagtttagataagtggtttgaactgctt
aattcttaa
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