Pseudoalteromonas lipolytica: D0907_09550
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Entry
D0907_09550 CDS
T05890
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0907_09550 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_09550 (recC)
Enzymes [BR:
pdj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D0907_09550 (recC)
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0907_09550 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Acetyltransf_6
Motif
Other DBs
NCBI-ProteinID:
AXV65504
UniProt:
A0AAD0S0Z0
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All DBs
Position
complement(2098581..2101883)
Genome browser
AA seq
1100 aa
AA seq
DB search
MLNIIQSNRMEALQARFHALLKVNPLTSPFKKEIVLVQSPGMSQWLKIGLSEHLGIAAQV
DFPLPSSFIWQLYQQLLPDVPSESPYNKANLAWKLFAILPDCIDEPLYLPLKTYLDGDTD
GQKTFALCEKIADVYDQYLMYRPHWIATWEQGTDQLDDVDIGIAPWQPDLWRRLVAHSKQ
LGQSQYHRANMQDQLLAALETMDSSLLPERISLFGISAIASSQLEVFQAIAKKTQVFLFF
FNPSEHYWGDTLDEKTAAKIAAKYAKRPHLDALEDHAKNPDHEYFFIGNPLLSSWGKLGR
DYFEQLLQLDAQWLDGFENEFDDTLLSQIHAEIYQLAFKGESLTPDKEWFINDECKLPIK
AGDTSIVLSDCHTPLREVERLHDYLLNLFNQNPHLTPKDIIVMMPDVGTYSPYIEAVFGG
AEGRRFIPYALADLAIEQEKPVLSSFASLADLPYSRFGVSDILDLLQVTQIAEKFNLEAH
EYEQIGFWLERVGVKWGLDAAHKDSFGLPAIDLNTWQHGLNRLLLGVAQRDEHLPFSGIY
SADEVEGMALNTLNKLIEFIDVLARYKEKLHDDAPLNEKAAILKALLGEIYSDEGEQSWD
LLVLQKVLDTFIKHYENGDYQGDVSQRIVSYLVKQGIQEKGVGQRFLVGQVNFCTLMPMR
AVPFKVVCMLGLNDADYPRTVQPIGFDLVPYSKRQKGDRSRKLDDRYLFLEAILSARENL
YISYIGRSCFDNQPRMPSTLVSELLEYIARSFKFDDEKDCHAALPEALINYQHLQPFNPA
YYLKAKQPAVTQLHSYNPVWIPAQSITPEPQQDLCVSPEQIVELNQFIRSVCQPHESFYQ
QSLGLRLPQFNDIAKDEEPFSLDALRRYFYLDEILEASILETPLNKAQIMQRGELPQAHV
GDLVFESMQHRVDALAGQVKAHIQDDELLPIEVKITLENTTLEGWLNHIYGQKQVFYRTA
SIKAKDVIKGFIQHLAAQIMGQHVETLILGLDKQISFSALSQDDARGYLNDWFMLYKALL
TRPVAFFPVSGYEYIKTNKDMAKANNKFAPQYIGVGEGENPYIRLTIRNLKDCEDEFIHW
SELLLSPLVELAQEADHANA
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaatataattcaatcaaatcgcatggaagcactgcaagcgcggtttcacgctctt
cttaaagttaatccgttaacgagtccattcaaaaaagaaattgtgcttgtgcagtcaccc
ggtatgtcgcagtggctaaaaataggcttaagtgaacatttaggcattgccgcacaggtt
gattttccactgccatctagtttcatttggcagctgtatcagcaactattgcccgatgtg
cccagtgaatctccctataataaagcaaaccttgcgtggaagctgtttgctattctgcct
gattgtattgacgagccgttgtatttacctctaaaaacgtatttagatggcgatactgat
ggccaaaagaccttcgcattatgtgaaaaaatcgccgatgtgtatgaccaatacctaatg
tatcgtccacattggattgccacgtgggagcagggcacagatcaactcgatgatgttgat
ataggcatagcaccttggcagcctgacctttggcgtaggctggtggcgcacagtaaacaa
cttggccaaagccaatatcatcgtgccaatatgcaagatcaattactcgctgcgcttgaa
acgatggatagcagcttattacccgagcgtattagcttatttggtatttcggcgattgcc
agtagtcagcttgaagtattccaagccattgcgaaaaaaacgcaggtgtttctgtttttc
ttcaatccaagcgagcactattggggtgacactttagatgaaaaaacggctgctaaaatt
gctgcaaaatatgccaaacgtccgcacctagatgcgcttgaagaccatgcaaaaaatccc
gaccatgagtacttttttattggcaatccgctgctatcgtcgtgggggaaattaggccga
gattactttgagcaattattgcagctagacgcgcagtggttagatggttttgagaatgaa
tttgatgacactttattatcgcaaattcacgctgagatttatcaattagcgtttaaaggc
gaatcgcttacacccgataaagaatggtttattaacgatgaatgtaaactgccaattaaa
gcaggcgataccagtattgtgctcagtgactgtcacacgccactgcgtgaagtagagcgg
cttcatgattacttactaaatttgtttaaccaaaacccacacttaacgccgaaagatatt
attgtgatgatgcccgatgttggcacctacagcccgtatatcgaggccgtttttggtggt
gcagaaggtcgtcgttttattccttatgcgttagccgatttagccattgaacaagaaaag
cctgtactgagttcatttgcaagtttggccgatttaccttactcacggtttggtgtgtct
gacattcttgatttactgcaagtcacacaaatagccgaaaagtttaacttagaggctcat
gaatacgaacaaattggcttttggcttgagcgagtgggcgttaaatggggcttagatgcc
gcgcataaagacagttttggtcttcctgctattgatttaaatacctggcagcatgggtta
aaccggttactgctaggggtggcacaacgtgatgagcacctaccattttcgggaatttac
agtgccgatgaagtcgaaggcatggcgttaaatacccttaataaattaattgaatttatt
gatgtattggctcgttataaagaaaaactacacgatgatgcaccattaaacgaaaaagcc
gcgattttaaaagccctgcttggcgaaatttacagtgatgagggcgagcaaagctgggat
ttactggtactgcaaaaagtgcttgatacgttcattaagcactacgaaaacggtgattac
caaggggatgtttcgcagcgtattgttagctatttagtaaagcaaggtattcaagagaaa
ggcgtaggacagcgctttttagttgggcaagtgaacttttgtacgctgatgccaatgcgt
gccgtgccctttaaagtggtgtgtatgctgggtctgaacgatgccgattaccctcgtact
gtgcagcccattggttttgacttagtgccgtattcaaaacgccaaaaaggcgaccgttcg
cgtaaactagatgacaggtatctgtttttagaagccattttaagcgcccgtgaaaactta
tatatcagttatattgggcgctcgtgttttgataaccaaccaagaatgccctcaacactc
gtcagtgagctgttagaatacatcgcccgtagctttaagtttgacgatgaaaaagactgt
cacgcggcactgcccgaggcgctgattaattatcagcacttgcaaccgtttaatcctgcc
tattatctcaaggctaagcagcctgcggtaacgcaattacacagctataacccggtgtgg
atacccgctcaaagtattacgccagagccacagcaagacctgtgtgtatcacccgagcaa
attgttgagctaaaccagtttattcgcagtgtgtgtcagccgcacgaaagcttttatcag
cagagtttgggcttaaggttgccgcaatttaatgatattgcgaaagatgaagagccattt
agccttgatgcactgcgtcgctatttctacttagatgaaattttagaggccagtattctt
gaaacgccacttaataaagcgcaaatcatgcaacgcggcgagttgccccaagcgcatgtt
ggcgatttggtgtttgaaagtatgcagcaccgtgttgatgcgttagcagggcaggtgaaa
gcccatattcaagatgatgagttgctgccaattgaagtcaaaataactcttgaaaatacc
accttagagggctggcttaaccacatttacgggcaaaaacaggtgttttatcgtaccgca
agcattaaagccaaagacgtgattaagggctttattcagcatttagctgcacagatcatg
ggccaacatgttgaaaccttaatacttggtttagataaacaaattagtttttcagcgctt
tcacaagatgatgcacgtggttatttgaacgattggtttatgctctataaagcattactt
acacggccagtggcattttttccagtaagtggctacgagtacattaaaacaaataaagac
atggcaaaagcgaataataaatttgccccgcaatatatcggggtgggtgaaggagaaaac
ccctatattcgcctaaccattcggaatctaaaagactgcgaagacgagtttattcattgg
agtgagctgcttttatcgccgctggttgaattagcgcaggaggctgaccatgcaaacgct
taa
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