Pseudoalteromonas lipolytica: D0907_09735
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Entry
D0907_09735 CDS
T05890
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdj03000
]
D0907_09735
Transcription factors [BR:
pdj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D0907_09735
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_5
HTH_30
HTH_28
HTH_24
PBP_like_2
HTH_AsnC-type
HTH_20
MarR
Sigma70_r4_2
MarR_2
HTH_23
HTH_Tnp_ISL3
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AXV65531
UniProt:
A0AAD0S3I8
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Position
complement(2139253..2140212)
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AA seq
319 aa
AA seq
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MDLRHISFRLLEVFMCVVKTRSISETARQLHLTQPTVSQQIKRLQETVNEPLIVVNQQRI
HITEAGFALFQTCQQVFGHFDDYQDYLVELRGGERGRCKIAIVNTAQYILPKLLGPYSNL
HPHVELPLEIGNRAEVLARFERGEDDIYVFSHPPSLEHAKAGRFLQNPLVFIAPMNHPLA
KSSHVTLHDLMTERFLLREPGSATRMLFESELQSRGFVLSDTVQMASNEAIRVAVGSGMG
LGVVSRHVLPAHDKSFCMLNVVDVQLASHWYFVVRTDRHLSHAARNFLRFAELNLEQCLD
KEWVTNELHTLNHSLTMKT
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtggacttacgacatatttcttttcggctattagaagtgtttatgtgtgtagttaaaaca
cgttcaattagtgaaacggcaaggcaattacatttaacgcagccaacagtatcgcagcaa
ataaagcgactgcaagaaactgtaaacgagcctctcattgtggttaaccagcagcgtatt
catattaccgaagctgggtttgctttatttcaaacttgtcagcaagtgtttggtcatttt
gacgattatcaagattatttggtggaattgagaggcggtgagcggggacgttgcaaaata
gcgattgtaaatacagcgcaatacatcctgccaaaactattagggccatacagtaattta
catccgcatgtagagcttccattagaaataggaaacagggccgaagtattggctcggttt
gaaagaggtgaagatgatatttatgtatttagtcatccaccgtcgcttgagcacgcgaaa
gcagggcgttttttacaaaatcccttagtgtttatcgccccgatgaatcacccactggct
aaatcttcacacgtaacactgcatgatttaatgactgagcgctttttactgcgtgagcct
ggttcggcgacacgcatgttattcgaaagtgagttacaaagccgtggctttgtacttagt
gacaccgtgcaaatggcaagtaatgaggctattagggttgccgtcggttctggaatggga
ttaggtgttgtgtctcgtcatgtattgccagcacacgataaaagcttttgtatgcttaat
gttgttgatgttcagctggcaagtcattggtattttgttgttcggacagatcggcattta
tctcatgctgcacgtaattttttaagatttgcagaacttaatttagaacagtgcttagac
aaagaatgggttacaaatgagcttcatacgctaaaccacagtttaaccatgaagacgtag
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