Pseudoalteromonas lipolytica: D0907_10510
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Entry
D0907_10510 CDS
T05890
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdj03016
]
D0907_10510 (miaB)
Enzymes [BR:
pdj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
D0907_10510 (miaB)
Transfer RNA biogenesis [BR:
pdj03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
D0907_10510 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
GETHR
Motif
Other DBs
NCBI-ProteinID:
AXV65660
UniProt:
A0AAD0S059
LinkDB
All DBs
Position
2304724..2306169
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AA seq
481 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSQKMADLLDATNGYQLTDEAEDADVILLNTCSIREKAQEKVF
HQLGRWKLLKDDKPDLIIGVGGCVASQEGDSIRQRAPFVDVIFGPQTLHRLPEMIKQVQS
GDSTSVVDVSFPEIEKFDRLPEPKAEGPSAFVSIMEGCSKYCTFCVVPYTRGEEVSRPLD
DVLLEVAQLAEQGVREVNLLGQNVNAYRGETHDGEICYFSDLLRYVAAIDGIDRIRYTTS
HPVEFTPDIIDAYADVPELVDHLHLPVQSGSDRILNLMKRGHTALEYKSTIRKLRKIRPN
LSMSSDFIIGFPGESKADFEATMNLINDIGFDMSFSFIYSARPGTPAADLPDDVSEQEKK
ERLYLLQNRITQMAQQISRQMFGTEQRILVEGPSKKNPMELRGRTENNRVVNFEGPHSVI
GQFVDVRITEALPNSLRGELIRTESEMNLRRDIAPSSILSKAAEADAAQAPNEIGVATFV
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagctgcatattaaaacctggggttgtcagatgaacgagtacgactctcag
aaaatggcggatctactggatgcgactaacggctatcagttaactgatgaagctgaagat
gcagatgtgatcttactcaacacctgttcaattcgtgaaaaagcgcaagaaaaagtattc
caccagctaggccgttggaagctattaaaagacgataaacctgaccttatcattggtgta
ggtggctgtgtagcgtcacaagaaggtgactcaattcgtcaacgtgcgccgtttgtcgat
gtaatttttggcccgcaaacgttacaccgtttaccagagatgattaagcaagtgcaaagt
ggcgacagtacatctgttgttgacgtatcattccctgaaatcgaaaagttcgaccgttta
cctgagccaaaagcagaaggcccaagtgcgttcgtatcgattatggaaggctgttctaaa
tactgtactttctgtgttgtgccatacacgcgcggtgaagaagtaagccgtccacttgat
gacgtactactcgaagtcgcccagctcgcagagcaaggcgtgcgtgaagtaaacttacta
ggtcaaaacgtaaacgcttaccgcggtgaaacgcatgatggcgaaatttgttacttctct
gacctactgcgttatgttgccgcgattgatggtattgaccgcattcgttacaccacttcg
cacccagtagagtttactcctgacatcatcgatgcatatgccgatgtaccagagcttgtc
gaccacttacatttaccagtgcaaagtggctctgaccgtattcttaatttaatgaaacgt
ggtcatacagctctagagtacaaatcaacgattcgtaaattacgtaaaattcgccctaac
ttaagcatgtcttctgattttatcattggtttccctggcgaaagcaaagcagactttgaa
gcaacaatgaaccttatcaatgatattggttttgatatgagcttcagctttatctacagt
gcacgccctggtacaccagcagctgatttaccggacgacgtatcagagcaagagaaaaaa
gagcgtttataccttttacaaaaccgtattacgcaaatggcacagcaaatcagtcgccaa
atgtttggcactgaacagcgaatcttagttgaaggtccttctaagaagaaccctatggag
ttacgtggccgtactgaaaacaaccgtgtggttaactttgaaggcccacattcagtgatc
ggtcaattcgttgatgtacgtattactgaagcgttgccaaactctttacgcggtgaatta
attcgtacagaatcagaaatgaacctgcgccgtgatattgcgccatcgtctattcttagt
aaagcagccgaagcagacgctgcacaagcccctaacgaaattggcgttgcaactttcgtc
ccttag
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