KEGG   Pseudoalteromonas lipolytica: D0907_10955
Entry
D0907_10955       CDS       T05890                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pdj  Pseudoalteromonas lipolytica
Pathway
pdj02024  Quorum sensing
pdj03060  Protein export
pdj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pdj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    D0907_10955
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D0907_10955
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D0907_10955
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pdj02044]
    D0907_10955
Enzymes [BR:pdj01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     D0907_10955
Secretion system [BR:pdj02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   D0907_10955
  Eukaryotic Sec-SRP protein
   D0907_10955
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA cobW AAA_33 YqeC ATP_bind_1 KTI12 APS_kinase AAA_31 FliD_C AAA_24 TsaE ABC_tran AAA_14 AAA_16 AAA_30 Thymidylate_kin Helicase_RecD PRP9_N AAA_17
Other DBs
NCBI-ProteinID: AXV65746
UniProt: A0AAD0S0E2
LinkDB
Position
complement(2400020..2401396)
AA seq 458 aa
MFENLQERLGKTLKNISGRGRLTEDNIKDTLREVRMAFLEADVALPVVRDFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGEANEELSLNAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLATEVGVEFFPSDISQKPVDIASNAIAHAK
KKFIDVVLVDTAGRLHVDSDMMDEIKALHSAINPIETLFVVDAMTGQDAANTAKAFDEAL
PLSGVILTKTDGDARGGAALSIRHITGKPIKFMGVGERTDALEPFHPDRIASRILGMGDV
LSLIEEVEMKVDKEKAAKVAEKVFKGDGFTLDDFAEQLRQMKNMGGMMSMLDKLPGMQNL
PDAVKGQMGDKTFVQMEAIINSMTPKERARPEIIKGSRKKRIAAGSGTQVQEINKLLKQF
TQMQKMMKKMKGKGGMMKMMRGMKGMLPPGMMGGGPKF
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgtttgagaatctccaagaacgcttaggtaaaaccttaaaaaatatcagtggccgcgga
cgcttaactgaagacaatattaaagatacattacgtgaagtccgcatggcatttttggaa
gcggatgttgcgttacccgttgttcgtgattttgttaagcaggttaaagaacgcgctgtt
ggcgttgaagtaactaaaagcttaagtccaggccaagtgttcattaaaatcgttcgtgaa
gagcttgaaaaagccatgggcgaagcaaatgaagagctaagcctgaatgcgcagccgcca
gcagttgtgatgatggcgggtttacaaggtgccggtaaaacgaccagtgtgggtaaactt
gctaagttcttaaaagaacgcaaaaagaaatctgtgcttgtggtgagtgctgacgtatat
cgtcctgcggcaatcaaacagcttgaaaccctagctactgaagtaggggttgagtttttc
ccaagtgatatttcgcaaaagcctgttgatattgccagtaatgcgattgcccacgcgaag
aaaaagtttattgacgttgttttagttgatacagcgggccgtttgcacgttgacagcgac
atgatggatgaaatcaaggcactacacagtgcgattaatcctattgagaccttatttgtt
gttgacgcaatgacaggtcaagatgctgcaaatacagcaaaagcgtttgatgaagcatta
ccactcagtggtgtgattctaacgaaaactgatggtgatgcccgtggtggtgctgcttta
tctattcgccatatcaccggtaagccgattaagttcatgggtgtgggtgagcgcaccgat
gctcttgaaccattccatcctgaccgtatagcgtcgcgtattctaggcatgggtgatgta
ctttcattgatcgaagaagtcgaaatgaaagtcgacaaggagaaagccgccaaagttgct
gaaaaagtatttaaaggcgatggctttacacttgatgattttgctgagcagctgcgccaa
atgaaaaacatgggcggtatgatgtcgatgcttgataaattgccaggtatgcaaaattta
cccgatgcagtaaaagggcaaatgggtgataaaacatttgtgcaaatggaagcgattatt
aactcaatgacgccaaaagaacgcgcccgtcctgaaatcattaaaggctcacgtaaaaaa
cgtattgcagcgggttctggtactcaagtacaagaaatcaataaattgcttaagcaattt
acgcagatgcaaaagatgatgaagaaaatgaaaggtaaaggcggcatgatgaaaatgatg
cgcggcatgaaagggatgttaccaccaggtatgatgggtggcggacctaagttttaa

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