Pseudoalteromonas lipolytica: D0907_12095
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Entry
D0907_12095 CDS
T05890
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D0907_12095 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_12095 (recO)
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D0907_12095 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D0907_12095 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Heme_oxygenase
Motif
Other DBs
NCBI-ProteinID:
AXV65959
UniProt:
A0AAD0S0J8
LinkDB
All DBs
Position
complement(2690091..2690777)
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AA seq
228 aa
AA seq
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MDSDFYTAYLLHRRPFSDSQVMLDMLVEGVGQLRMLARISGRQATKHKAQLQPFQSLLVQ
YSGKSDLKYINRFEPHGTQTMLTGNELYCGFYLNELTNRIVPINEPMESVYHLYKQHLSD
LSGTQHLQAVLRSYEFQLLELLGYGVDFSVDAHGDEIIGSASYQYFAEYGFLLHDDPHSG
FSGAQLNAIAAHDFSAPDVLYMAKQLSRYLLKPLLGKKPLKSRELFIK
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgatttctacacagcatacttgttgcaccgacgtccatttagtgactcacaa
gtaatgcttgatatgctggtagaaggcgtggggcagcttagaatgctggcccgaattagt
ggtcgccaggccactaaacataaagcacaactgcaacctttccaatcactgctggtacaa
tacagcggtaaatcagatttaaaatacattaatcgttttgaaccccatggcacgcaaacc
atgctcacggggaatgagttgtattgtggattttatttaaacgaattaaccaatcgtatc
gtacctatcaatgaacccatggaaagtgtttaccatttgtataaacagcacttgagtgat
ttatcgggtactcaacacttgcaagcagtgttacgttcgtatgaatttcagttactcgaa
ttgctcggttatggggttgattttagtgtcgacgcgcacggtgatgagatcattggcagt
gccagttaccagtactttgctgaatatggctttttgctgcatgacgacccgcacagtggt
ttttcaggtgcgcaattaaatgccattgctgcccatgacttcagcgcgcctgatgtgtta
tatatggcaaagcagttaagtcgttacttactcaagcctttactcggtaaaaagccatta
aaaagtcgtgagttatttattaagtag
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