Pseudoalteromonas lipolytica: D0907_12750
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Entry
D0907_12750 CDS
T05890
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj00260
Glycine, serine and threonine metabolism
pdj00460
Cyanoamino acid metabolism
pdj00630
Glyoxylate and dicarboxylate metabolism
pdj00670
One carbon pool by folate
pdj00680
Methane metabolism
pdj01100
Metabolic pathways
pdj01110
Biosynthesis of secondary metabolites
pdj01120
Microbial metabolism in diverse environments
pdj01200
Carbon metabolism
pdj01230
Biosynthesis of amino acids
pdj01240
Biosynthesis of cofactors
pdj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
D0907_12750
09102 Energy metabolism
00680 Methane metabolism
D0907_12750
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
D0907_12750
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
D0907_12750
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
D0907_12750
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
D0907_12750
Enzymes [BR:
pdj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
D0907_12750
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AXV66079
UniProt:
A0AAD0S0U0
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All DBs
Position
complement(2833677..2834933)
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AA seq
418 aa
AA seq
DB search
MLERSMNISDFDPELFAAITKETARQEEHIELIASENYCSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRANELFGTDYANVQPHAGSQANAAVFQALLQPHDTVLGMS
LAHGGHLTHGSHVNFSGKTYNAIQYGLNEETGEIDYAQVEALALEHKPKMIIAGFSAYSG
IVDWAKFREIADKVDAYLFVDMAHVAGLIAAGVYPSPIPHAHVVTTTTHKTLAGPRGGLI
VSACGDEEIYKKLNSAVFPGGQGGPLCHIIAAKAVAFKEALQPEFKTYQAQVVKNAQAMV
EVLQERGYKVVSGKTDNHLFLLDLIDKDITGKDADAALGNANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEAESKELAGWICDVLDNINDASVQAEVKEKVKAICKKLPVYA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgtagcatgaatatttcggatttcgatccagagttatttgcagccatcact
aaagagacggctcgtcaagaagagcacatcgaactgatcgcgtctgaaaactactgtagc
ccacgcgtgctagaagcacagggttctcagcttacaaacaaatatgctgaaggttatcca
ggcaaacgttactatggcggttgtgagcacgttgacgttgttgaacaattagcaattgac
cgtgcaaacgagttattcggcacagactacgcaaacgtacaaccgcacgctggttcacaa
gctaatgcggctgttttccaagcgcttcttcagccacatgacaccgtactaggtatgagc
ttagctcatggtggccacttaacgcatggttcacacgttaacttttctggtaaaacgtac
aacgcaattcaatatggcctaaatgaagaaacgggcgaaattgattacgctcaagttgaa
gcactagcactagagcacaaaccaaaaatgatcattgcgggtttctctgcatactcaggt
atcgttgattgggctaagttccgtgaaatcgctgataaagtggatgcgtacttattcgta
gatatggcacacgttgcaggtcttattgcggctggcgtatacccaagcccaatccctcac
gcgcatgttgttacaacaacaactcataaaacattagcgggtcctcgtggcggtctaatt
gtttctgcgtgtggtgatgaagagatctataaaaagcttaacagcgccgtattcccgggt
ggccaaggtggtcctttatgtcacatcatcgctgctaaagcggttgcgtttaaagaagca
ttacagcctgaattcaaaacataccaagcgcaagtggttaaaaacgcacaagcaatggtt
gaagtgttacaagagcgtggctataaagttgtttctggtaaaacagacaaccacttattc
cttctagacctaattgataaagatatcacaggtaaagatgctgacgctgcccttggtaat
gcaaacatcacagtaaacaaaaactcagtaccaaatgacccacgttcaccgtttgtaacg
tcgggtcttcgtattggttctccggcaattacgcgccgtggtttcaaagaagctgagtct
aaagaacttgctggctggatctgtgacgtactagacaacatcaacgatgcatcagtacaa
gcagaagtaaaagagaaagttaaagcaatctgtaaaaaactacctgtttacgcttaa
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