Pseudoalteromonas lipolytica: D0907_13740
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Entry
D0907_13740 CDS
T05890
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdj02044
]
D0907_13740
02035 Bacterial motility proteins [BR:
pdj02035
]
D0907_13740
Secretion system [BR:
pdj02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
D0907_13740
Bacterial motility proteins [BR:
pdj02035
]
Pilus system
Pilus assembly proteins
D0907_13740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Phage_holin_3_6
SesA
CTV_P33
Ribosomal_L6e_N
Motif
Other DBs
NCBI-ProteinID:
AXV66265
UniProt:
A0AAD0WDE0
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Position
3054571..3055797
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AA seq
408 aa
AA seq
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MSKVQEKQSLDTFEWVGVSARGKKLEGELSGQSIALVKAQLRKQGITPSKVKRKAKPLFG
TRVQKITPKDIALITRQIATMLMAGVPLIQSIEMIGSGAKNKSVARLMEEIGDEVKAGVP
LSQALRKHPRYFDDLYCDLVASGEQSGALDKIFDRVALYKEKAEALKSKIKKAMFYPIAV
LVVALIVTSILLIFVVPQFQDIFNGFGAELPAFTLMVIGISEFMQEYWWIMLIAVIAFGY
AYKEALLKSKKLRDANDRAILKLPVIGMILNKAAVARYARTLSTTFAAGVPLVDALDSAA
GASGNAVYRYAILEIKAEVSSGNLMNWAMRNSKIFPDMVIQMVAIGEESGSLDGMLAKVA
TIYEQEVDDAVDGLSSLLEPLIMAVLGVLVGGLIIAMYLPIFQLGSVI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttcaagaaaagcaatctttagatacttttgaatgggttggtgtaagtgct
cgaggcaagaaattagaaggagagctttcagggcaaagcattgccttagtcaaagctcaa
ttgcgtaagcaaggcatcaccccttcaaaagtaaaacgtaaggcaaaacctttatttgga
actcgggttcaaaaaattacccctaaagacattgctttaattacacgccaaatagcgacc
atgctaatggcaggtgtaccgcttattcaatctattgaaatgataggttcaggtgctaag
aataaaagtgttgctaggctgatggaagaaattggtgacgaagtgaaagcgggtgtgcca
ctctcgcaagctttacgcaaacacccccgctattttgatgatttatattgcgaccttgtt
gcgtctggtgagcaatcgggtgcccttgataaaattttcgaccgtgtcgcactttataaa
gaaaaagccgaagcattaaagtctaaaatcaaaaaagcaatgttctacccgattgcggta
ttagttgtggccttaatcgttacctcaatcttacttatttttgtggtgcctcaattccaa
gatatttttaacggctttggtgctgaacttcctgcctttactttaatggtgataggtata
tctgaatttatgcaagagtattggtggataatgctgattgctgttattgcttttggctat
gcctataaagaagccctgcttaaaagcaaaaaactcagagatgccaacgacagagctata
ttaaagttacctgttattggcatgattttaaataaagcagcagtagctcgctatgcacgc
actctttcaacaacctttgctgcgggtgtacccttggttgatgcgctcgattcagccgcg
ggagcctcaggtaatgcggtgtaccgttacgctattttagaaattaaagcagaagttagc
tcaggtaatttgatgaactgggcgatgcggaactctaaaatatttcctgatatggtgatc
caaatggttgcaattggtgaagagtcaggctctttagatggcatgcttgccaaagtagcc
actatttatgagcaagaggttgatgacgcagtcgatggcctttcaagcttattagagccg
ctgatcatggctgtacttggtgtgctggtcggtggtttaattattgccatgtatttacct
attttccagttaggttccgtcatttaa
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