Pseudoalteromonas lipolytica: D0907_14805
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Entry
D0907_14805 CDS
T05890
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj00521
Streptomycin biosynthesis
pdj00523
Polyketide sugar unit biosynthesis
pdj00525
Acarbose and validamycin biosynthesis
pdj00541
Biosynthesis of various nucleotide sugars
pdj01100
Metabolic pathways
pdj01110
Biosynthesis of secondary metabolites
pdj01250
Biosynthesis of nucleotide sugars
Module
pdj_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D0907_14805 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D0907_14805 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
D0907_14805 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D0907_14805 (rfbB)
00525 Acarbose and validamycin biosynthesis
D0907_14805 (rfbB)
Enzymes [BR:
pdj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
D0907_14805 (rfbB)
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AXV66466
UniProt:
A0AAD0S1S4
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All DBs
Position
complement(3296570..3297658)
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AA seq
362 aa
AA seq
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MKILLTGGAGFIGSAVVRYIINHTEDSVVNLDKLTYAGNLESLKTVDTNERYTFEKVDIC
NRAELGRVFKVYKPDAIMHLAAESHVDRSITGPAEFIQTNIVGTYTLLEAAREYWNTLDI
NSQKAFRFHHISTDEVYGDLPHPSEHEGELPLFTEQTAYAPSSPYSASKASSDHLVRAWL
RTYGLPTIITNCSNNYGPYHFPEKLIPLVILNALDGKDLPIYGKGDQIRDWLYVEDHARA
LYKVVTEGEVGETYNIGGHNEKQNIEVVQTICSILDELVPKGTKYAEQIKFVNDRPGHDR
RYAIDSSKMSKELNWTPIETFESGLSKTVKWYLDNQSWCQNVQDGSYQRERLGEISTVNQ
GK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctactgaccggtggtgctggctttataggctcagcggttgtacgctatatt
atcaaccacacagaagactcagttgttaatttggataagcttacttatgctggcaattta
gaatcgctgaagacagtggacacaaatgaacgttataccttcgaaaaagttgatatttgc
aatcgtgctgagcttggtcgtgtttttaaagtatataaaccagatgctataatgcattta
gccgcagaaagccatgtagaccgttcaataacaggccccgcagaatttattcaaacaaat
attgttggtacttatacattattagaggctgctcgtgaatattggaatacattagacata
aatagtcaaaaagctttccgctttcatcacatatcaaccgatgaagtttatggtgattta
cctcacccatctgaacatgaaggcgaattacctctatttactgaacaaactgcatatgca
ccaagtagcccctattcagcgagtaaggcatcgagtgatcacttggtaagagcatggtta
agaacatatggacttcctacaattataaccaactgctcaaacaattatggaccatatcac
tttcctgaaaaacttattccgcttgttattttaaatgcgcttgatggtaaagatttgcct
atttatggtaaaggtgatcaaattcgtgattggttgtatgtagaagaccatgccagagct
ttgtataaagtagtgacagaaggcgaagtaggtgaaacatataacataggtggtcataac
gaaaagcaaaatattgaagttgttcaaacaatttgcagcattttagatgagttagtgcct
aaaggaactaaatatgcagagcaaattaaatttgtgaatgatcgaccagggcatgaccgt
cgctatgcaatagactcttcaaaaatgagtaaagaactaaactggacaccgatcgaaact
tttgaatcaggtttaagtaaaacagtaaaatggtatttagataaccaaagctggtgtcaa
aatgtgcaagatggctcatatcaacgagaacgtcttggcgaaataagcacggtaaatcaa
ggtaaataa
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