Pseudoalteromonas lipolytica: D0907_15170
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Entry
D0907_15170 CDS
T05890
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdj01011
]
D0907_15170
Enzymes [BR:
pdj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D0907_15170
Peptidoglycan biosynthesis and degradation proteins [BR:
pdj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D0907_15170
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
AXV66889
UniProt:
A0AAD0S2F5
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All DBs
Position
3384384..3385868
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AA seq
494 aa
AA seq
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MKYLLLLSFFIGLQGCQTTQQDTQQEQQARPEIFSHFKPDLSLQTQPTEQPVATADKTAE
PVKLQPYKDTPLAKPRAADLWQHIANNLSLVFQTNKHTTARIKWYLKQPAYLEKVNRRAA
PYLYHIVKRVEKQNLPMELALLPFVESDFRPTIQSSEQAVGIWQLVGATAYHFGVQSDQW
YDGRQDILASTDAALAYLSYLHKRFDGDWLHAIAAYNSGEGRVKKAIEKNKKLGKKTDYW
SLSLPKETAEYIPKLLALSHLIRHPEKGLKRPKLANKPLTTEFNVGQQFDFSVIASLSGI
GRNQLHKLNPGYLKNQSSPNGPHTLILPIEQRTLLQSKLFRNNFIGEYTVQKDDTLYRIA
RRFNMPISQLKMLNNKTSNLIKVGEQLRLSKPQTMPGSLIVDYNISPYLEQQEDVVSTVA
VDYQVKPGDSIWSISQLFDVPHKDVAIWNKLSASSLLKPGTILTLHIPQAKPPAPQTSAS
EAMLSGIESSLKKP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatttactattgctgagtttttttattggcctacaaggatgccaaacaactcag
caagatacacaacaagagcaacaggctcggccagagatttttagccatttcaagcctgat
ttaagcttacaaacacagccgactgagcaacctgttgctacagccgataagactgctgaa
cctgtaaaacttcaaccttataaagatacgccactcgctaaaccgcgagcggctgatttg
tggcaacacattgcaaataatctatcgttggtatttcaaaccaataagcatacgacagct
cggataaagtggtacttaaagcaaccagcctaccttgaaaaagtgaaccgacgcgctgca
ccgtatctttaccatatcgtcaaacgcgtcgaaaaacagaatttaccgatggagcttgca
ttactccccttcgtagagagtgactttagacccactattcaatcatcagagcaagctgtg
gggatatggcagttagttggggcaactgcctatcactttggcgtgcagagcgaccaatgg
tatgacggccgccaagatattctcgcctcaaccgatgctgccttagcgtacctcagttat
ttgcacaaacgctttgatggcgattggttacacgcaatcgcggcctataacagtggtgaa
gggcgtgttaagaaagccatcgagaagaataaaaaactcggtaagaaaaccgattactgg
tcgctgtcattaccaaaagaaaccgctgaatatatccctaaattattagcactcagccac
ttaatcagacaccctgaaaaaggcctaaaacgcccaaaactcgctaataaaccgctcaca
acggagtttaatgtcggccagcaatttgatttttcggtaattgcgagtttatctgggatt
gggcgtaaccaattacataaactaaaccctggctatttaaagaatcaaagctctcctaat
ggcccccacacgctgatattaccaatagagcagcgaactttattacagagtaagctattt
cgtaataactttattggcgagtacaccgttcaaaaggacgatacgctttatcgcatcgca
agacgttttaatatgcctataagccaattaaaaatgctcaataataaaacctcgaatctc
attaaagtgggtgagcaattgcgcctaagtaaacctcaaacgatgcctggatcgttaata
gttgattacaatatcagcccgtatttagagcaacaagaagacgttgtttcaactgttgct
gtcgattatcaagtaaagccgggggattctatttggagcattagtcagctttttgatgtc
cctcataaagacgtggctatttggaataaactcagcgcgtctagcctactaaaaccaggc
accatactaactttgcatatccctcaagcaaagccaccagcccctcaaacatccgccagc
gaggctatgctgtcgggtattgaaagctctttgaaaaagccttga
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