Pseudoalteromonas lipolytica: D0907_16860
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Entry
D0907_16860 CDS
T05890
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_16860
Enzymes [BR:
pdj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
D0907_16860
DNA repair and recombination proteins [BR:
pdj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
D0907_16860
Prokaryotic type
D0907_16860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Methyltransf_34
Motif
Other DBs
NCBI-ProteinID:
AXV66997
UniProt:
A0AAD0WDZ4
LinkDB
All DBs
Position
unnamed1:128288..129679
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AA seq
463 aa
AA seq
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MKTLFWFRRDLRLFNNDALYRAIDNGCQDAVFFITEKQWQQHDVAPIQIDLLKRRLAFLG
QLLADKGITLHLIDAHDYSGCVDKLSAFCQQHSIENVYANNEYELNEVERDNAFLAKADS
LDVHFYSYDGDVIAPPGSIKNQSGEMFKVFTPFKNAWLKQFQDTHFYFAEPPNMPPAVQW
QENELLTSDGSSEKWPVDDETLSHVCARFIDEKLGTYQEQRDIPSIKGTSGLSPYLALGI
ISVHQLLALIQQRHPDVLKNAKSSLFCWVNELIWREFYRHLIAIYPNLSKYANFNDKYDA
LAWRDDEHDFNAWCEGKTGYPLVDAAMRQLLQTGWMHNRLRMVVASFLTKHLLIDWRKGE
RFFMKHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPITQSERFDPDGEFIRKYLPELE
KIPAKHIHFPHDYLAKQGSKSSYWSPIVDHKAARERALNAFKV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattattttggtttaggcgcgatttgcgcctttttaataacgacgctttatat
cgcgctatcgacaatggatgccaagatgcggttttttttataaccgaaaaacaatggcaa
caacatgatgtagcacctattcagattgatttattaaagcgccgtttagcatttttaggg
caacttttagctgataaaggcattacattacaccttattgatgcacacgattattcgggg
tgtgttgataagctctcagcgttttgccaacagcattctattgaaaatgtttatgcaaat
aatgaatacgaactcaatgaagttgaacgagataatgcatttttagctaaagctgattcg
ctagatgtacatttttacagctatgatggtgatgttattgcccccccaggcagtattaaa
aaccaaagtggcgagatgtttaaagtgttcacgcctttcaaaaatgcgtggttaaagcag
tttcaagatacgcatttttattttgccgagcctcctaatatgccacctgcagttcagtgg
caagaaaatgaattattaacctctgacggcagctccgaaaaatggccggttgatgatgaa
acgctaagccatgtatgtgcacgctttatcgacgaaaagcttggtacgtatcaggaacaa
cgtgatatcccaagtattaaaggcacctcaggtttaagcccttatttagcgctgggtatt
attagtgttcatcagttgctggcgctcattcagcagcgtcatcccgatgtattgaaaaat
gctaaaagtagtctgttttgctgggtaaacgagttgatttggcgcgagttctatcgtcac
ctgattgcgatttatccaaatttgagtaaatacgccaactttaacgataaatacgatgcc
ctagcatggcgcgacgacgaacatgactttaatgcgtggtgtgaaggtaaaaccggctat
ccgcttgtggatgcagcaatgcgacaattattgcaaaccggctggatgcataaccggttg
cgaatggtggttgctagtttcttaactaagcacctccttattgattggcgcaaaggcgaa
cgcttttttatgaaacacttgattgatggcgatctggcgtcaaacaatggtggatggcaa
tgggctgctagcacagggtgtgatgctcaaccttattttcgtatttttaatccaattacc
caaagcgagcgctttgatccagatggtgagtttatccgtaaatatctaccagagttggaa
aaaatacctgcgaaacacattcacttcccacatgactacttagctaaacagggaagtaaa
agcagttattggtctccaatagttgatcataaagcggcgcgagagcgtgcgttgaacgcg
tttaaggtgtga
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