Pseudoalteromonas lipolytica: D0907_17540
Help
Entry
D0907_17540 CDS
T05890
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0907_17540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdj03000
]
D0907_17540
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_17540
Enzymes [BR:
pdj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
D0907_17540
Transcription factors [BR:
pdj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D0907_17540
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D0907_17540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AXV67127
UniProt:
A0AAD0S2Z5
LinkDB
All DBs
Position
unnamed1:273254..274603
Genome browser
AA seq
449 aa
AA seq
DB search
MTSQQWRTARQSRDARFDGVFFVAVKSTGIYCRPICPAPTAQEKNVEYYQYAHLAAQDGF
RPCIRCRPDSAPNSPAWLGTKTTALRAKQLIDKGEAYDCEVLADRLGVSSRYLRRLFNQH
FGLSITQYRLFNQCNFAKQLLQETDLSVADIAFASGFNSIRRFNDAFLKQLNIAPSKLRK
TDKKPSATLNLTLAFRPPYNWQALHGFLQRRLIKGLEWLSETSYGRTFKDSHCQGQFTAQ
FVEQKNHFKVTIDIDNTRYLQQVIHNIRRVLDLDADTHTIEAHLNAELNNAMPLTQGLRL
PGIWSDFEAGIRAVLGQQVSVTAAHNLVTKLVAEFNQACDTVFFPSPEWLANSELSFFKM
PQSRKDALNRLSEYCHQHPDNQKLDNWLSLKGIGPWTVNYAKLRGQSNPDILLAGDLGIK
KALAEVGEFDSERCAPFRSYLTFQLWQQL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgactagccaacaatggcgtacagcaaggcaaagccgtgatgcccgatttgatggggta
ttttttgtcgcggtaaaaagtaccggtatatattgtcggccaatttgtccagcaccgaca
gcgcaagagaaaaatgttgaatactatcagtacgcgcatttagcggcacaggatgggttt
cgcccttgtattcggtgtagacctgatagtgcaccgaatagtcccgcgtggttaggaact
aaaaccacggcgctaagagcaaagcaacttattgacaaaggcgaggcatatgattgtgaa
gtgctggccgatagattaggtgtgtcgagtcgttatttgcgtcgtttgtttaatcagcac
tttggtctttcaatcacacaatatcgcttattcaatcagtgcaattttgctaagcagctg
ttacaagaaactgatttatcggttgctgacatcgcttttgcatctggttttaatagtatt
cgccgttttaacgacgcatttttaaagcagcttaatattgcaccatcaaaattgcgaaaa
accgataaaaaaccaagtgcaacgttaaatttaactttggcgtttcgtccaccttataac
tggcaggctttacatgggtttttacagcgccgcttaattaaaggtctcgaatggcttagc
gaaacaagctatgggcgcacatttaaagactcgcattgccaagggcaatttactgctcaa
tttgttgaacaaaaaaatcattttaaagtcacgatagatattgataacacccgctattta
caacaagtgatccataacattcgtcgtgtacttgatttagatgctgatacgcacacgatt
gaagcccatttaaatgccgaacttaataatgccatgccattgacacaaggcttacgcttg
ccgggtatttggtcagattttgaagcgggtattcgcgcagtcttgggtcaacaagtgagt
gtgactgctgcgcacaacttggtaactaagctggtcgctgagtttaatcaagcgtgtgat
accgtgttttttccatctccagaatggcttgccaattcagaattgagcttttttaaaatg
cctcaatcacgcaaagacgctttaaaccggttaagtgagtattgtcatcaacatcctgat
aatcaaaagcttgataattggctgtcactaaaagggattggcccatggacagttaattac
gctaagctgcgaggtcaaagtaaccctgatattttacttgccggtgacttaggcattaaa
aaggctttagcagaggtcggtgaatttgatagtgagcgctgtgcacctttccgttcttat
ttaacatttcaactatggcaacaattatga
DBGET
integrated database retrieval system
