Pseudoalteromonas lipolytica: D0907_18410
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Entry
D0907_18410 CDS
T05890
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pdj
Pseudoalteromonas lipolytica
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_18410 (sbcD)
DNA repair and recombination proteins [BR:
pdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D0907_18410 (sbcD)
Archaeal homologous recombinant proteins
D0907_18410 (sbcD)
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Ortholog
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Fer4_12
VWA_2
CW_binding_2
Motif
Other DBs
NCBI-ProteinID:
AXV67289
UniProt:
A0AAD0S4H8
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All DBs
Position
unnamed1:complement(477848..479080)
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AA seq
410 aa
AA seq
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MKVLHTSDWHLGQQFYEHSRFEEHQAFLNWLTETLAAQHIDLLLVAGDIYHTATPPASAE
NQLYQFIKNTKQRCPDLHIVIIAGNHDSANRIMAAKPLLAQFDTHVVGRFDTASPKDVVL
PISTKNGQAHVVAMPFLRSSDLSHYNRQEEQPLSYNQTVALAYKDALNAASELPKAPLIV
MGHLHAKGGDISTDSERNLVIGGEEAISANIFSEQADYVALGHLHKAQTVAKSETIRYSG
TPMPMSFSERRYQHQVMLIELSDSSCTVNPLYIPSFCKVILLPEKDCVPLSELCELLSEL
DLSDENLAPYLRVKLSAHDTDTTFREQIEQALAGKQLKFCGIERVRQERNHQDDEQALFD
DVSQIEALNPHSLLEQAFANHKDMAGQAVPKELEDLLSHVIDELNTEDVL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtccttcatacttctgattggcatttaggccaacaattctacgaacattcccgc
ttcgaggaacatcaggcttttttaaactggttaacggagactctcgcagcacagcacatc
gacttattactcgttgctggcgatatttatcacacggcgacaccgcctgcgagtgctgaa
aaccaactctaccaatttattaagaacaccaaacaacgttgcccagatttacacatcgtg
attattgctggtaatcatgactcggcaaaccgtatcatggctgcaaaacccttactggct
caatttgatacgcatgtggtgggtcggttcgataccgcaagcccaaaggatgtcgtactg
cctatatcaacaaaaaatggccaagcacatgttgttgccatgccatttttacgaagcagc
gatttaagtcattataatcgccaagaagagcaacctttaagttacaaccaaacagtggca
ctggcttataaagatgcactaaatgctgccagtgagttaccgaaagcgccgctaattgta
atgggacacctccatgcaaaaggcggcgatatttcgacagactcagagcgaaacttagtg
attggcggtgaagaagcgatctctgctaatatttttagtgaacaggctgattacgtagcc
cttggtcacttgcataaagcacaaaccgtcgccaagtctgagaccattcgctacagtggc
acccccatgccgatgtccttttctgagcgccgttaccagcaccaagttatgttaattgag
ctttctgattcaagttgcactgtaaaccccctttacataccgagcttttgtaaagtcata
ctgctccccgaaaaagactgtgtgccgctgagtgaattgtgtgagctgttgagtgaactt
gatttaagcgatgaaaacttagcgccctatttacgcgttaaactgagcgctcacgacacc
gacaccacgtttagagagcaaattgaacaagcgctggcaggtaagcagcttaagttttgt
gggattgaacgggtgcgacaagagcgcaatcatcaagacgatgagcaagccttgtttgac
gatgtgtcgcaaatcgaagccctcaatccgcattcgttgttagagcaagcctttgccaat
cataaagatatggcagggcaagcagtgccaaaagagctcgaagacttattaagccacgtt
atcgatgagttgaatacggaggacgtgctatga
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