Pseudomonas aeruginosa DK2: PADK2_00020
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Entry
PADK2_00020 CDS
T02161
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pdk
Pseudomonas aeruginosa DK2
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdk03032
]
PADK2_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
pdk03400
]
PADK2_00020 (gyrB)
Enzymes [BR:
pdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PADK2_00020 (gyrB)
DNA replication proteins [BR:
pdk03032
]
Prokaryotic type
DNA Topoisomerases
PADK2_00020 (gyrB)
DNA repair and recombination proteins [BR:
pdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PADK2_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFM62299
LinkDB
All DBs
Position
4275..6695
Genome browser
AA seq
806 aa
AA seq
DB search
MSENNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCSE
ISITIHTDESITVRDNGRGIPVDIHKEEGVSAAEVIMTVLHAGGKFDDNTYKVSGGLHGV
GVSVVNALSHELRLTIRRHNKVWEQVYHHGVPQFPLREVGETDGSGTEVHFKPSPETFSN
IHFSWDILAKRIRELSFLNSGVGILLRDERTGKEELFKYEGGLKAFVEYLNTNKTAVNEV
FHFNVQREEDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLAGFRSALTRNLNNYIE
AEGLAKKFKIATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGYIYIAQPPLYKVK
RGKQEQYIKDDQAMEEYMTQSALEDASLHVNEHAPGLSGAALEKLVNEYRGVIATLKRLS
RLYPQELTEHFIYLPTVSVDDLANESAMQGWLEKFQARLTAAEKSGLTYKASLREDRERH
LWLPEVELVAHGLSSYVTFNRDFFASNDYRSVSLLGDQLNSLLEDGAYVQKGERKRPISA
FKDGLDWLMAEGTKRHSIQRYKGLGEMNPEQLWETTMDPNVRRMLKVTIEDAIAADQIFN
TLMGDAVEPRRDFIESNALAVSNLDV
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaacaacacgtacgactcttccagcatcaaggtgctgaaggggctggatgcc
gtacgcaagcgccccggcatgtacatcggcgacaccgacgatggcaccggtctgcaccac
atggtgttcgaggtggtggataactccatcgacgaagcgctggccggttactgcagcgaa
atcagcatcaccatccatacggatgagtcgatcactgtccgcgacaatggacgcggtatt
ccggtggatatccacaaggaagaaggggtttctgcggcggaagtaatcatgaccgtcctc
cacgccggcggcaagttcgacgacaacacctacaaggtgtccggcggcttgcacggtgtg
ggcgtctcggtggtgaacgcgctgtcccatgaactacgcctgaccatccgtcgccacaac
aaggtctgggaacaggtctaccaccacggcgttccgcagttcccactgcgcgaagtgggc
gagaccgatggctccggcaccgaagttcacttcaagccgtccccggagaccttcagcaac
atccacttcagttgggacatcctggccaagcgcatccgcgagctgtccttcctcaactcc
ggcgtcggcatcctgctgcgcgacgagcgtaccggcaaggaggagctgttcaagtacgaa
ggcggtctgaaggccttcgtcgagtacctgaacaccaacaagaccgcggtgaacgaggta
ttccacttcaacgtccagcgtgaagaggacggcgtgggtgtggaagtcgccttgcagtgg
aacgacagcttcaacgagaacctgctctgcttcaccaacaacatcccgcagcgtgacggc
ggtacccacctggccggtttccgttcggcgctgacgcgtaacctgaacaactacatcgag
gccgaaggcctggcgaagaagttcaagatcgccaccaccggcgacgatgcccgcgaaggc
ctcaccgcgatcatctcggtgaaggtaccggacccgaagttcagctcgcagaccaaggac
aagctggtctcctccgaggtgaagactgcggtggaacaggagatgggcaagtacttcgcc
gacttcctgctggagaatcccaacgaagccaaggccgtggtcggcaagatgatcgacgcc
gcccgtgcccgcgaggccgcgcgcaaggcgcgcgagatgacccgccgcaagggcgcgctg
gacatcgccggcctgcccggcaaactggccgattgccaggaaaaggacccggcgctctcc
gaactgtacatcgtggagggtgactccgcgggcggttccgccaagcagggccgcaatcgc
cggacccaggcgatcctgccgctcaagggcaagatcctcaacgtcgaaaaggcgcgcttc
gacaagatgctctcctcccaggaggtcggtacgctgatcactgccctgggctgtggcatc
ggtcgcgaggaatacaacatcgacaagctgcgctaccacaacatcatcatcatgaccgat
gctgacgtcgacggttcgcacatccgcaccctgctgttgaccttcttcttccgccagatg
cccgagctgatcgagcgtggctacatctacatcgcccagcccccgttgtacaaggtcaag
cgcggcaagcaggagcagtacatcaaggacgaccaggccatggaagagtacatgacccag
tcggccctggaagacgccagcctgcacgtcaacgagcacgctccgggcctgtccggagca
gcgctggagaaactggtcaacgagtatcgcggggtgatcgccaccctcaagcgcctgtcg
cgcctgtacccccaggagctaaccgagcacttcatctacctgcctaccgtgtcggtggac
gacctggctaacgagtcggccatgcagggctggttggagaagttccaggcgcgtctgacc
gccgccgagaagtccggcctgacctacaaggccagcctgcgcgaagaccgcgagcgccac
ctgtggctgcccgaggtggaactggtggcccacggcctgtccagctacgtcaccttcaac
cgtgacttcttcgccagcaatgactaccgctcggtgtcgctgctcggcgaccagctgaac
agcctgctggaagacggcgcctacgtgcagaagggtgagcgcaagcgcccgatcagcgcc
ttcaaggacggcctggactggctgatggccgaaggtaccaagcgccacagcatccagcga
tacaaggggctgggcgagatgaaccctgagcagctgtgggaaaccaccatggatccgaac
gtccggcgcatgctcaaggtgaccatcgaggacgccatcgccgccgaccagatcttcaac
accctgatgggcgatgccgtggagccgcgccgcgacttcatcgaaagcaacgcgctggcg
gtgtcgaacctggacgtgtga
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