Pseudomonas aeruginosa DK2: PADK2_00415
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Entry
PADK2_00415 CDS
T02161
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pdk
Pseudomonas aeruginosa DK2
Pathway
pdk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PADK2_00415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdk02044
]
PADK2_00415
Secretion system [BR:
pdk02044
]
Type VI secretion system
Imp/Vas secretion system core components
PADK2_00415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AFM62378
LinkDB
All DBs
Position
complement(95548..96882)
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AA seq
444 aa
AA seq
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MSWSNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGFSELKLDDALLTQGKL
AIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEGEALG
GARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGLGEYAAVGVARVREKRADQAL
SLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVVASSAGGASEIADFLLLQL
VNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQRRPEEYPVYNHDDLAASFAP
VMLALRQALATVIDAKAIAIPIVEKAYGVHVAMLSDRSLIDNASFVLVVRADVPGESLRG
HFPQQAKVGSVEHIRDLVNLQLPGIGLLPMPVAPRQIPYHAGSTYFELDRGSAHWKQLTH
SGGFAFHIAGQFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggagtaaccgcgtggtgtggtccgaaggcatgttcctgcggccacaacatttc
cagcagcacgaccgctacctggaaaccctggtggatggccgctgccgctcgctcctggcg
ggcggctggggcttttccgagctgaagctggacgatgccctgctgacccagggcaagctg
gccatcgtcagcgcccgcggcgtgctgccggatggtacgccgttcaacatccccgccgac
gatccggcgccggcgccgctgaatgtcgaggaaagcctgcgcgatggcatcgtctacctc
ggcctgccgctgaagcgggtcggcacccgcgacacggtagaggagggcgaggccctcggc
ggcgcccgctacgtcagccaggtgcaggaagtgcgcgacgacaatgccgccttcgagagc
cgcgccccggtggccctgggcagccaggcgttccgcctgctgaccgagcgcgacggcctc
ggcgaatacgccgcggtgggcgtcgcgcgggtccgcgagaagcgcgcggaccaggccctg
agcctggacgaggactacctgccgccggtgctcgacattgccgccgcgccgcccctggcg
tccttcgccaaggagctgctgggcctgctccaccagcgcggcgaagccctcgccgggcgg
gtggtggcatccagcgccgggggcgcctcggaaatcgccgacttcctgctgctgcaactg
gtcaaccgcgccgaggccctcaccggtcacctgtcccgcgtgcgcccgctgcacccgcag
gagctgtaccgcgaactggtggccctggccggcgagttctgtaccttcaccgccagccag
cggcgtcccgaggagtacccggtgtacaaccacgacgacctggccgccagcttcgccccg
gtgatgctcgccctgcgccaggcgctggcgacggtgatcgacgccaaggcgatcgccatc
ccgatcgtcgagaaggcctacggcgtgcacgtcgcgatgctcagcgaccgcagcctgatc
gacaacgccagcttcgtcctggtggtgcgcgccgacgtccccggcgagagcctgcgcggg
cacttcccgcagcaggccaaggtcggctcggtggagcacatccgcgacctggtcaacctg
caactgccgggtatcggcctgctgccgatgccggtggcgccgcggcagatcccctaccac
gccggctccacctatttcgaactggaccgcggcagcgcgcattggaagcagctgacgcac
tccggcggcttcgccttccacatcgccggccagttccccgggctgaacctggccttctgg
gccattcgaggataa
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