Pseudomonas aeruginosa DK2: PADK2_04360
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Entry
PADK2_04360 CDS
T02161
Name
(GenBank) putative murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pdk
Pseudomonas aeruginosa DK2
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdk01011
]
PADK2_04360
Enzymes [BR:
pdk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PADK2_04360
Peptidoglycan biosynthesis and degradation proteins [BR:
pdk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PADK2_04360
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AFM63165
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All DBs
Position
complement(937390..938736)
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AA seq
448 aa
AA seq
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MRNPERSALLKVSGLLGSTVVAMGLGLSSACAQKNPTVEYNQPAAPLQTKAPFSGAGPAA
SVPAGAPNEAQPGQSFEQWRDAFRQQALAGGIDAQTFDRAFAGVQPDPAVVEADRSQPEF
TRPVWKYLEGALDPLRVRQGQARLAQHARILGEVDARYAVDADAVVAIWGMESNYGSHMG
NKNVIRSLATLAYEGRRPEFAHAQLLAALKILQHGDVPASFMIGSWAGAMGQTQFIPTTY
NQYAVDFDGDGKRDIWGSPGDALASTANYLKASGWIAGQPWGFEVRLPAGFDYSLAELTI
RKPLGEWQGMGVQGVNGGPLPSGLSGEQASLLLPAGHRGPAFLVLHNFRAILKYNNSSAY
ALAVGLLADSFKGGGRIVGAWPLEDVPLSRSQRIELQRQLAARGHDPGAVDGIIGANTRK
AIRACQQEFGWPADGYPTPALLDRLRTP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaccccgaacgatccgccctgctgaaggtgagcgggctgctgggcagcaccgtc
gtcgccatggggcttggcctctccagcgcctgcgcgcagaagaatccgacagtcgaatac
aaccagcctgccgctcccctgcagaccaaggcgcccttctccggcgccggcccggccgcc
tcggtgcccgctggcgcgccgaacgaggcccagcctgggcaaagcttcgaacagtggcgc
gacgccttccgtcaacaggcgctggccggtggaatcgatgcgcagaccttcgatcgcgcc
ttcgccggcgtccagcccgatcccgccgtggtcgaagcagaccgcagccagccggaattc
acccgaccggtatggaagtacctggaaggcgccctcgatccgctgcgcgttcgccagggc
caggcgcgcctggcgcagcatgcgcgcatcctcggcgaagtcgacgcgcgctatgcggtg
gatgcggatgcggtggtggcgatctggggcatggagagcaactacggttcgcacatgggc
aacaagaacgtgatccgctccctggcgaccctcgcctatgaaggacgccgcccggaattc
gcccacgcccagttgctcgccgccctgaagattctccagcacggcgacgttccggcctcc
ttcatgatcggctcctgggccggcgccatgggccagacccagttcatcccgaccacctac
aaccagtatgccgtggacttcgacggcgacggcaagcgtgacatctggggctcgcccggc
gacgccctggcctccaccgccaactacctgaaagcctccggctggatcgccggacaaccc
tggggtttcgaagtccgcctgccggcaggcttcgactattccctggcggaactcaccatc
cgcaagcccctgggcgaatggcaagggatgggcgtacaaggcgtcaacggcggccccctg
ccctccggactctccggcgaacaggcctcgctgctgctgccggccgggcaccgcggcccg
gccttcctggtgctgcacaacttccgcgccatcctcaagtacaacaactccagcgcctac
gccctggccgtcggcctgctcgccgacagcttcaagggcggcggccggatagtcggcgcc
tggccgctggaggatgttccgctgagccgctcgcagcgcatcgagctgcaacggcaactg
gccgcccgcggacacgatccgggcgcggtggatggcatcatcggcgccaatacgcgcaag
gcgatccgcgcctgccagcaggagttcggctggccggcggacggctatccgaccccggcg
ctgctcgaccgcctgcggacgccatag
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