Entry |
|
Symbol |
truD
|
Name |
(GenBank) tRNA pseudouridine synthase D
|
KO |
|
Organism |
pdk Pseudomonas aeruginosa DK2
|
Brite |
KEGG Orthology (KO) [BR:pdk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:pdk03016]
PADK2_06210 (truD)
Enzymes [BR:pdk01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PADK2_06210 (truD)
Transfer RNA biogenesis [BR:pdk03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PADK2_06210 (truD)
Prokaryotic type
PADK2_06210 (truD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1344901..1345968
|
AA seq |
355 aa
MSVLGELDLLGPRAHGAACGEAVLKAVAEDFQVDEVLDIPLSGEGEHLWLWVEKRGLNTE
EAARRLGRAAGVQQKNVSYAGLKDRQALTRQWFSLHLPGKADPDLGAAEGADLRILRRTR
HSRKLQRGAHAANGFTLRLTGLRAERALLDARLERIAADGVPNYFGLQRFGHGGGNLVDA
RSCAEQDLLPANRNLRSRFLSAGRSYLFNRLLAERVAEGSWNRAAVGDLLAFTDSRSFFL
AGEEECRDTRLAALDLHPTGPLWGEGDPPSGAGVLDRELALAGSEPALCRWLAKAGMAHE
RRILRLPIQGLAWHYPEPDVLQLEFVLPAGCFATVVVREILDLVPTGQTENPCAY |
NT seq |
1068 nt +upstreamnt +downstreamnt
atgagcgttctcggcgaactcgacctgctcgggccgcgcgcccatggggcagcctgcggc
gaggcggtgctcaaggccgtggccgaggacttccaggtcgacgaggtgctggacattccc
ctcagcggtgaaggcgagcacctctggttgtgggtggaaaagcgcggattgaacaccgag
gaggcggcccgtcgcctcggccgcgccgccggcgtgcagcagaagaacgtcagctacgcc
gggttgaaggaccgccaggccctgacccggcaatggttcagcctgcacctgccgggcaag
gccgatcccgacctgggcgcagccgagggcgcggacctgcggattcttcgccgcacccgt
cattcgcgcaagttgcagcgaggcgcgcatgccgccaacggcttcaccctgcgtctgacc
gggctgcgggcggagcgtgcccttctcgacgcgcgcttggaacgtatcgccgcggacggc
gtgcccaactatttcggcctgcaacgcttcggccacggcggcggcaacctggtcgacgcg
cgcagttgcgcggaacaggacctgctgccggcgaaccgcaacctgcgttcgcgcttcctt
tccgccgggcgcagctacctgttcaaccgcctgctcgccgagcgggtcgcggagggtagc
tggaaccgggcagcggttggcgacctgctggccttcaccgacagccgcagctttttcctc
gctggcgaggaagaatgccgcgatacccgtctggccgccctcgacctgcaccccaccgga
ccgctctggggcgagggcgatccgccgagcggcgccggcgtcctcgaccgcgagctggcc
ctggccgggagcgagccggcgctctgccgctggctggcgaaggcgggcatggcgcacgaa
cggcgcatcctgcggctccccatccaggggctggcgtggcattatcccgaacctgatgtt
ctgcaactggaattcgtcctgccggccggttgtttcgccaccgtagtggtgcgtgaaatc
ctcgacctggtaccgacagggcagacggaaaacccatgcgcatactga |