| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
pdk Pseudomonas aeruginosa DK2
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pdk00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PADK2_07550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pdk03019]
PADK2_07550
03400 DNA repair and recombination proteins [BR:pdk03400]
PADK2_07550
Enzymes [BR:pdk01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PADK2_07550
Messenger RNA biogenesis [BR:pdk03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PADK2_07550
DNA repair and recombination proteins [BR:pdk03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PADK2_07550
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1629187..1631325
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| AA seq |
712 aa
MREQALRILKDVFGYDAFRGNQARIIERVAEGGDALVLMPTGGGKSLCFQVPALLREGLT
VVVSPLIALMEDQVATLDELGVPAVALNSTLNPEQQRDIAERLQRGEIKLLYLAPERLVQ
PRMLAFLQRLPVGLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPQVPRIALTATADMRT
REEMIQRLHLQNAEQFLSSFDRPNIFYRIVPKEQPRKQLLGFLSERRGDAGIVYCLSRKK
VEEVAEFLGNQGFPALPYHAGLSNELRAHHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLLLRQMMQSSEGDERHKRVERHK
LEAMLALCEETRCRRQALLAYFDEEMPQPCGHCDNCVDGVETWDATESARQALSAIYRSG
QRYGVGHLVDILLGRETEKIRSLGHQHLAVFGIGKGRGEDEWRTLFRQLVARGLADVDLD
GFGGLRLTEACRPLLRGEVRLELRRDLKPQRAKGSSSGGASAASQLVRSEEREMWEALRA
LRRKLAEEHSVPPYVIFPDATLLEMLRSQPRSLSDMAQVSGVGARKLERYGQAFLDVLTD
SPAAPAAPPQDLRHELASLACAGMTPAQIARQLNCSEKNVYAMLAEAIAGQQVSLEQALD
LPEELLGEIQDAFLEEDGELPPVAALEERFGKRVPSGVLHCVRAALQVELES |
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| NT seq |
2139 nt +upstreamnt +downstreamnt
atgcgcgagcaagccctacgcatcctcaaagacgttttcggttacgacgccttccgtggc
aaccaggcacggatcatcgagcgggtagccgaggggggcgatgcgctggtactgatgccc
accggcggtggcaagtccctgtgtttccaggtcccggcgctgctgcgcgaaggcctgacg
gtggtggtgtcgccgctgatcgcgctgatggaggaccaggtcgccaccctggacgaactc
ggcgtgccggcggtggcgctgaactccaccctcaaccccgagcagcagcgggacatcgcc
gagcgcctgcagcgtggcgagatcaagctgctctacctggcaccggagcggttggtccag
ccgcgcatgctggccttcctgcaacgactgccggtcggcctgttcgccatcgacgaagcg
cattgcgtgtcgcaatggggccatgacttccgtcccgaatacctgcagctcggccagctt
gccgagctgttcccgcaggtgccgcggatcgccctgaccgccaccgcggacatgcgtacc
cgcgaggagatgatccagcgcctgcacctgcagaacgccgagcagttcctctccagcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggagcagccgcgcaagcagttgctc
ggcttcctctccgagcggcgcggcgatgccggcatcgtctactgcctgtcgcggaagaag
gtcgaggaggtcgcggaattcctcggcaaccagggcttccccgcgctgccgtatcacgcc
ggactgtccaacgaactgcgtgcccaccaccagaagcgcttcctcaacgaggaaggcttg
atcatggtggcgaccatcgccttcggcatgggcatcgacaagcccaacgtgcgtttcgtc
gcccacctcgacctgcccaagagcctcgaggcctattaccaggaaaccggccgcgccggc
cgcgatggcctgccggccgacgcctggatggcctacggcctgcaggacgtcctgctgctg
cggcagatgatgcagagttccgagggcgacgagcggcacaagcgcgtcgagcggcacaag
ctggaagccatgctggcgctctgcgaggaaacccgttgccgacgccaggcgctgctggcc
tatttcgacgaggagatgccgcagccctgcgggcattgcgacaactgcgtggacggcgtg
gaaacctgggatgccaccgaatccgcgcgccaggcgctgtcggcgatctaccgcagcggc
cagcgctacggcgtcggccatctggtggatatcctgctcggccgcgagaccgagaagatc
cgcagtctcggccaccagcacctggcggtgttcgggattggcaaggggcgtggcgaagac
gaatggcggaccctgttccgccagttggtcgcgcgcggcctggccgacgtcgacctggac
ggcttcggcggcctgcgcctgaccgaggcctgtcgtccgctgctgcggggcgaggtgcgg
ctggagctgcgccgcgacctcaaaccacagcgcgccaagggctcctccagcggcggcgcc
agcgccgccagccaattggtgcgcagcgaagagcgggaaatgtgggaggccctgcgcgcg
ctgcggcgcaagctggccgaagagcattcggtgccgccctatgtgatcttccccgacgcg
accctgctggaaatgctccgcagccagccgcgctcgctatccgacatggcccaggtcagc
ggggtcggcgcgcgcaagctggagcgctacggccaggccttcctcgatgtcctcaccgac
tcgccggcggcgcccgccgcgccgccgcaggacctgcgccacgaattggccagcctggcc
tgtgcggggatgaccccggcgcagatagcccgccagctcaattgcagcgagaagaacgtc
tacgcgatgctcgccgaggccatcgccggtcagcaggtgagcctggagcaggcgctggat
ctgcccgaggaactcctcggcgaaatccaggacgccttcctcgaggaagacggcgaactg
ccgccggtggcggcgctggaggagcgtttcggcaagcgggtgccgagtggcgtgctgcac
tgcgtacgcgccgccctgcaggtggaactggagtcgtga |
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