Pseudomonas aeruginosa DK2: PADK2_07800 Help Entry PADK2_07800       CDS       T02161                                  Name (GenBank) ATP-dependent helicase HrpA   KO K03578   ATP-dependent RNA helicase HrpA [EC:5.6.2.6] Organism pdk  Pseudomonas aeruginosa DK2 Brite KEGG Orthology (KO) [BR:pdk00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pdk03019]     PADK2_07800 Enzymes [BR:pdk01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      PADK2_07800 Messenger RNA biogenesis [BR:pdk03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Others      PADK2_07800 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3418 OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 NACHT AAA_25 ABC_tran T2SSE AAA_23 Motif Other DBs NCBI-ProteinID:  AFM63853 LinkDB All DBs Position 1691341..1695321 Genome browser AA seq 1326 aa AA seqDB search MTDQTPSLDQLVRRLDQAQISDRHRLRRQLHELRKQPDDARLAQWVERFQASCAKVEARR ASVPAIRYDDSLPIAAKRDEIKAAIAAHQVVVIAGETGSGKTTQLPKICLELGRGIHGLI GHTQPRRLAARSVATRVAEEIGTPLGALVGYQVRFEDQSDDSTLVKLMTDGILLAETQHD RYLERYDTLIVDEAHERSLNIDFLLGYLKTLLHRRPDLKLIITSATIDLERFSRHFDGAP VIEVSGRTYPVETWYRPLAAETDEEGNRVEDDLSVDQGILAALDEIAAHEREVGKRPGDV LVFLPGEREIRDAAEMLRKANLRHTEVLPLYARLTPAEQQKIFQPRPGRKIVLSTNVAET SLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAVSQASANQRKGRCGRVEPGICVRLYS EEDFNARPAFTDPEILRTNLAAVILQMLHLRLGDIEAFPFIEPPDGKAIKDGFTLLQELS AVNREGQLTPLGRQLARLPIDPRLGRMLLEAAQQGSLEEVLTVASALSVQDPRERPVERQ QAADQAHAQWKDPDSDFAALINLWRGFEEQRQALGSNALRSWCRKNFLNYLRLREWRDAH RQLTLICRELKLPFGRPAKAEARKPEAKKGASADNEREVPGIDYAAVHKAILSGLLSQIG QKAEEGDYLGARQRRFWIHPSSGIARKRPQWIMAAELVETTKLFARMVAKIEPDWLEPLA GHLIKTNHFEPHWEKRRGQVVAFEQVTLYGLIVIGRRPVHYGPIDPPVARELFIREGLVR GEINSRAKCLSANRQLLEKLDELEAKARRRDILADEETLFAYYDARLPADIYQTASFEKW YARERQNQPDLLLMREEDVLAREASEVTAAQYPDRLRLGDLHLSLSYQFEPGTARDGVTV RVPAPLLPQLPAERIDWLVPGLLYDKAVALVRNLPKAIRKSFVPVPDFVRAALERITFGE GSLPQALGRELQRMTGVRVADEAWAEAATQLDDHLRMNIEVVDAQGKFLGEGRDLAELIA RFAEASQAALAIPQADKEQQRPVEAKAFASVAEKAQQKVAGLSMTVYPALVEEQGEVKEG RFPTQAEADYQHRRALQRLLLQQLAEPAKYLRAKLPGQTEMGLLYRELGRVEALVEDILL ASLDSCVLQGESLPRDGAALAALAERKRAAWNEHAERLARLVLDILKLWHGLQKRFKGKV ELAMTVPLNDVKGQLANLVYPGFVRATPLEWLKEYPRYLKAIEQRLDKVAGQVQRDRVWS GELGELWAQYQARLAKHAQEGKRDAELQVYRWMLEEYRVSLFAQQLGTRLPVSDKRLAKQ WSQVEG NT seq 3981 nt NT seq  +upstreamnt  +downstreamnt atgaccgaccagactccttcccttgaccaactcgtccggcgcctcgaccaggcccagatc agcgaccgccaccgcttgcgccggcagctccacgaactgcgcaagcagcccgacgacgcg cgcctggcgcagtgggtcgagcgcttccaggcctcctgcgccaaggtcgaggcgcggcgc gccagcgtgccggcgatccgctacgacgacagcctgccgatcgccgccaagcgcgacgag atcaaggccgctatcgccgcccaccaggtggtggtgatcgccggcgagaccggctcgggc aagaccacccagttgccgaagatctgtctggagctgggtcgcggcatccacggcctgatc ggccatacccagccgcgtcggctggcggcgcgcagcgtggcgacgcgggtcgcggaagag atcggcacgccgctgggcgcgctggtcggctaccaggtgcgcttcgaggaccagagcgac gacagcaccctggtcaagctgatgaccgacggcatcctcctggccgagacccagcatgac cgctacctggagcgctacgacacgctgatcgtcgacgaagcccacgagcgcagcctgaac atcgacttcctcctcggctacctgaagaccctgttgcaccggcgtccggacctgaagctg atcatcacctcggcgaccatcgacctggagcgtttctcccggcatttcgacggcgccccg gtgatcgaggtttccggccgcacctatccggtggagacctggtaccggccgctggcggcg gaaaccgacgaggagggcaaccgggtcgaggacgacctgtcggtggaccagggcatcctc gccgccctcgacgagatcgccgcccacgaacgcgaggtcggcaagcggcccggcgacgtg ctggtgttcctccccggcgagcgggagatccgcgacgccgcggagatgctgcgcaaggcc aacctgcgccacaccgaggtgctgccgctgtacgcgcgactgaccccggccgagcagcag aagatcttccagccgcgcccgggacgcaagatcgtgctgtccaccaacgtcgcggaaacc tcgctgacggtgccgggcatccgttacgtgatcgacagcggcaccgcgcggatcagccgc tacagctaccgcgccaaggtccagcggctgcccatcgaggcggtgtcgcaggccagcgcc aaccagcgcaagggccgttgcggacgggtcgagccgggcatatgcgtgcgtctctacagc gaggaggacttcaacgcgcgtccggccttcaccgacccggaaatcctccgcaccaacctg gccgcggtgatcctgcagatgctgcacctgcgcctcggcgacatcgaggcgttccccttc atcgagccgccggacggcaaggcgatcaaggacggcttcacccttctgcaggaactgtcg gcggtcaaccgcgaaggccagctgaccccgctggggcgccaactggcgcgcctgccgatc gacccgaggctgggccgcatgctgctggaggcggcccagcagggtagcctcgaggaagtg ttgacggtggccagcgcgctgtccgtgcaggacccgcgcgagcgtccggtggagcggcag caggccgccgaccaggcgcacgcgcaatggaaggacccggattccgacttcgccgcgctg atcaatctctggcgtggcttcgaggagcagcgccaggcgctgggttccaatgccctgcgc agctggtgccggaagaacttcctcaactacctgcgcctgcgtgagtggcgcgacgcccac cgccaactgaccctgatctgccgcgaactgaagctgccgttcgggcgtccggccaaggcc gaggcgcgcaagccggaggcgaagaaaggcgcgtcggccgacaacgaacgcgaggtaccg gggatcgattacgcggcggtccacaaagcgatcctgtccggcctgctcagccagatcggg cagaaggccgaggaaggcgactacctcggcgctcgccagcgacgtttctggatccatccg tccagcggcatcgctcgcaagcgcccgcaatggatcatggccgcggaactggtggagacc accaagctgttcgcccgaatggtcgcgaagatcgagccggactggctggagccgctggct gggcacctgatcaagaccaaccacttcgagccgcactgggagaagcgtcgcggccaggtg gtggcgttcgagcaggtcaccctctacggcctcatcgtcatcggtcgacgtccggtgcac tacggtccgatcgacccgccggtggcgcgcgagctgttcatccgcgaaggcctggtgcgc ggtgagatcaacagccgcgccaagtgcctgagcgccaaccggcagttgctggaaaagctc gacgagctggaagccaaggcgcgccggcgcgacatcctggccgacgaggaaaccctgttc gcctattacgacgcgcgcctgccggcggatatctaccagaccgccagtttcgagaaatgg tacgcccgcgagcggcagaaccagccggacctgctgctgatgcgcgaggaagacgtgctg gcccgtgaagccagcgaagtcactgcggcgcagtacccggatcgcctgcgcctgggcgac ctgcacctgtcgctgagctaccagttcgagcccggcaccgcgcgcgacggcgtcaccgtg cgggtaccggcgccgctgctgccgcaattgccggccgaacgcatcgactggctggtgccc ggcctgctctacgacaaggcggtggcgctggtgcgcaacctgccgaaggcgatccgcaag agcttcgtgccggtaccggacttcgtccgcgccgccctggagcgcatcaccttcggcgaa ggttcgctgccgcaggcgctgggccgcgagcttcagcgcatgaccggcgtgcgggtagcc gacgaggcctgggccgaggcggcgacgcagttggacgatcacctgcggatgaacatcgag gtggtcgacgcccagggcaagttcctcggcgagggccgcgacctggccgaactcatcgcg cgtttcgccgaagccagccaggcggcgctggcgataccccaggccgacaaggaacagcag cgtccggtggaggccaaggccttcgccagcgtcgccgagaaggcccagcagaaggtcgcc ggattgtcgatgacggtatacccggcgctggtggaggagcagggcgaggtcaaggaaggg cgcttcccgacccaggccgaggccgactaccaacaccgccgcgccctgcaacgactgctg ttgcagcaactggccgagccggccaagtacctgcgcgccaagctgccggggcagaccgag atgggcctgctgtaccgcgagctgggacgggtcgaggcgctggtcgaggacatcctcctg gccagtctcgacagttgcgtgttgcagggcgaaagcctgccgcgcgacggcgccgccctg gccgcgctggccgagcgcaagcgcgctgcctggaacgagcacgccgagcgcctggcacgc ctggtgctggatatcctcaagctctggcacggcctgcagaagcgcttcaagggcaaggtc gagctggccatgaccgtgccgctgaacgacgtcaagggccaactggccaacctggtgtat ccggggttcgtccgcgccaccccgctggagtggttgaaggagtatccgcgttacctcaag gccatcgagcagcgcctggacaaggtcgccggccaggtccagcgcgaccgggtgtggagc ggcgagctgggcgaactctgggcgcaataccaggcgcgcctcgccaagcacgcccaggaa ggcaagcgcgacgccgagttgcaggtgtatcgctggatgctggaggagtaccgggtctcg ctgttcgcccagcaactgggaacccggctgccggtctcggacaagcgcctggccaagcag tggagccaggtcgagggctag

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