Pseudomonas aeruginosa DK2: PADK2_13440
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Entry
PADK2_13440 CDS
T02161
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
pdk
Pseudomonas aeruginosa DK2
Pathway
pdk02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PADK2_13440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdk02044
]
PADK2_13440
Secretion system [BR:
pdk02044
]
Type VI secretion system
Imp/Vas secretion system core components
PADK2_13440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
Motif
Other DBs
NCBI-ProteinID:
AFM64969
LinkDB
All DBs
Position
complement(2895076..2896560)
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AA seq
494 aa
AA seq
DB search
MPKSSAAEQSGESSTQTLSLLDEIIAKGRMAHDDSQQDYARDMLAEFATQVLDEGMAVDK
DTVAMINDRISQIDALISDQLNQIIHHPELQKLEASWRGLHQLVSNTETSARLKLRLLNV
GKNELQNDLEKAVEFDQSALFKKIYEEEYGTFGGHPFSLLIGDFTFGRHPQDIGLLEKLS
NVAAAAHAPFIAAASPRLFDMNSFTELAVPRDLTKIFESLELIKWRAFRESEDSRYVSLV
LPNFLLRLPYGPETRPVEGMNYVEDVNGTDHSKYLWGNAAWVLAQRITEAFAKYGWCAAI
RGAEGGGAVEGLPAHTFRTSSGDLSLKCPTEVAITDRREKELNDLGFISLCHKKNSDVAV
FFGGQTTNKARLYNTNEANANARLSAMLPYVLAASRFAHYLKVIMRDKVGSFMTRDNVQT
YLNNWIADYVLINDNAPQEIKAQYPLREARVDVSEVAGKPGAYRATVFLRPHFQLEELSA
SIRLVANLPPPVAA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtcatccgccgccgaacaatccggcgagagttcgacccagaccctgtccctg
ctcgacgagatcatcgccaagggccgcatggcccacgacgacagccagcaggactatgcc
cgcgacatgctcgcggaattcgccacccaggtcctcgacgagggcatggccgtcgacaag
gacaccgtggcgatgatcaacgaccgcatcagccagatcgatgcgctgatcagcgaccag
ctcaaccagatcatccaccaccccgagttgcagaagctggaagcctcctggcgcggcctg
caccaactggtgagcaacaccgagaccagcgcgcggctcaagctgcgcctgctgaacgtc
ggcaagaacgaactgcagaacgacctggagaaggcggtcgagttcgaccagagcgcactg
ttcaagaagatctacgaagaggaatacggcaccttcggcggacatcccttcagcctgctg
atcggcgacttcaccttcggtcgccatccgcaggacatcggcctgctggagaagctgtcg
aacgtcgccgcggctgcccacgcgccgttcatcgccgccgccagcccacgcctgttcgac
atgaacagcttcaccgaactggccgtgccgcgcgacctgaccaagatcttcgagagcctg
gagctgatcaagtggcgcgccttccgcgagagcgaggactcgcgctacgtgtcgctggtg
ctgccgaacttcctcttgcgcctgccctacggcccggagacgcgaccggtggaaggcatg
aactatgtcgaggacgtcaacggcaccgaccactccaagtacctctggggcaacgccgcc
tgggtcctggcgcagcgcatcaccgaggccttcgccaagtacggctggtgcgcggcgatc
cgcggcgcggaaggcggcggcgcggtcgagggcctaccggcgcacacgttccgcaccagc
tccggcgacctgtcgctgaagtgcccgaccgaggtggcgatcaccgaccgccgcgagaag
gaactcaacgatctcggcttcatttccctgtgccacaagaagaacagcgacgtggcggtg
ttcttcggcggccagaccaccaacaaggccaggctctacaacaccaacgaggccaacgcc
aacgcgcgcctgtcggcgatgctgccgtacgtgctggcggcatcgcgcttcgcccactac
ctgaaggtgatcatgcgcgacaaggtcggcagcttcatgacccgcgacaacgtgcagacc
tacctgaacaactggatcgccgactacgtgctgatcaacgacaacgcaccgcaggaaatc
aaggcgcagtacccgctgcgcgaggcgcgggtggatgtcagcgaggtggccggcaaaccg
ggggcctaccgcgccacggtgttcctccggccgcacttccagctcgaggaactcagcgcg
tcgatccgcctggtcgccaacctgccgccgccggtagcggcgtga
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