Pseudomonas aeruginosa DK2: PADK2_21950
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Entry
PADK2_21950 CDS
T02161
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pdk
Pseudomonas aeruginosa DK2
Pathway
pdk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PADK2_21950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdk03400
]
PADK2_21950
Enzymes [BR:
pdk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PADK2_21950
DNA repair and recombination proteins [BR:
pdk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PADK2_21950
Prokaryotic type
PADK2_21950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFM66655
LinkDB
All DBs
Position
complement(4717383..4718078)
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AA seq
231 aa
AA seq
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MTDNDDRIKLEASWKEALREEFDKPYMKQLGEFLRQEKAAGKAIFPPGPLIFNALNTTPL
ENVKVVIIGQDPYHGPGQAHGLCFSVQPGVPTPPSLQNIYKELNRDLNIPIPNNGYLQRW
AEQGVLLLNTSLTVEQAKAGSHANAGWQPFTDRVIEVVNERCERLVFLLWGSHAQSKQKL
IDPQRHLILKSAHPSPLSAYRGFLGNGHFSRTNKFLEQNGKTPIDWSLPDL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataacgacgaccgcatcaagctcgaggcgagctggaaggaagcgttgcgcgag
gaattcgacaagccctacatgaagcaactgggcgagttcctgcgccaggagaaagccgcc
ggcaaggcgatcttcccgcccgggccgttgatcttcaacgcgctgaacaccacgccgctg
gagaacgtcaaggtggtgatcatcggccaggatccctaccacggaccaggccaggcccac
ggcctgtgcttctcggtgcagcccggcgtgccgacgccgccgtccttgcagaacatctac
aaggaactcaaccgcgacctgaacatcccgattcccaacaacggctacctgcagcgctgg
gcggagcagggcgtgctgttgctcaatacctccctgaccgtcgagcaggccaaggccggc
tcccacgccaatgccggctggcagccgttcaccgaccgcgtcatcgaggtggtcaacgag
cgttgcgagcgcctggtgttcctgctctggggcagccacgcgcagagcaagcagaagctg
atcgacccgcagcgccacctgattctcaagtcggcgcacccgtcgccgttgtcggcctac
cgcggtttcctcggcaacggccacttcagccgcaccaacaagttcctcgagcagaacggc
aagacgcctatcgactggtcgctgccggacctctga
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