Pseudomonas aeruginosa DK2: PADK2_23775
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Entry
PADK2_23775 CDS
T02161
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pdk
Pseudomonas aeruginosa DK2
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdk03032
]
PADK2_23775
03400 DNA repair and recombination proteins [BR:
pdk03400
]
PADK2_23775
Enzymes [BR:
pdk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PADK2_23775
DNA replication proteins [BR:
pdk03032
]
Prokaryotic type
DNA Topoisomerases
PADK2_23775
DNA repair and recombination proteins [BR:
pdk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PADK2_23775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_recom
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AFM67018
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All DBs
Position
5115042..5116817
Genome browser
AA seq
591 aa
AA seq
DB search
MLTVGVGQDFKPHYQILSGKEKTVARLKELRQKAVEIYVASDPDREGESIGWHILQAAGI
KNYKRVAFKEITKSCISAELSSPRHLDLPKVASQECRRVIDRLVGYLVTPELRRVMGRPT
TAGRVQSVAVYLVVLREREIHAFTAIKHFGVELGFVSPSDGRTWKAEWDPVPTFASKEFP
YVQDRQLAELVGAIRNVIVETCIDGEETDTPPAPFISSSLQMAAGNALKWSPDKTMKIAQ
RLYEQGLITYHRTDNPNISKDSMPDIRAVAKALGLKCVEQQRMFKADQDAQEGHPAITPT
DWMAATAGETADEQALYQLIRVRALASQIEAAVYAVRTITLLGVGPDKKPLRFGAKGKLL
NVPGWRKLLQGDDAEEQKNETPSNPIPALEPGQILKVYSGEVLEKKTTPPKRFTDASLVG
EMKRRGIGRPSSYASIVKNIIDKGLVQMKGRSLIPGELGEATIALLEHNFSFLSLDFTRN
LEVALDRIANSEDTYMNVVQQFYQLLQTELQTLRALPSAQDEPRESSTASISSAPTSDFL
CGKCGLPLVHRKKAGKGGFDFWGCSGYRTIGCKVSYPSKSGRPDFDNPRGL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccgtcggcgtgggccaggatttcaaaccgcactaccagatcctctcgggcaag
gaaaaaaccgtcgcacggctgaaggagctgcggcagaaagccgtggaaatctacgtcgcc
tccgacccggatcgcgaaggcgaaagcatcggctggcacatcctccaggctgccgggatc
aagaactacaagcgcgttgccttcaaggaaatcaccaagtcgtgcatcagcgccgaactc
agctcgccgcgccacctggacctcccgaaagtcgcctcgcaggaatgccgtcgcgtcatc
gatcgcctggtggggtatctggtcacgccagagctgcggcgcgtgatgggtaggccaacc
accgccgggcgcgtgcagtccgtcgccgtgtacctggtggtcctgcgagagcgggagatt
cacgccttcacagcaatcaagcatttcggggtggaactgggcttcgtttcgccaagcgac
ggccgtacctggaaggcggagtgggatccagtgcccacgtttgccagcaaggagttcccg
tatgtccaggatcgtcaacttgcagaactggtgggggctatacgcaatgtgatcgtcgag
acctgcattgatggcgaagaaaccgatacgcctccggcgccgttcatctcctcttcgctc
cagatggcagccgggaatgcactgaagtggtcacccgacaagacgatgaagatcgcccag
cggctgtatgaacaggggctcatcacctaccaccggacggacaaccccaatatttcgaag
gactcgatgccggatatccgtgctgtcgccaaggccttgggcctgaagtgcgttgagcaa
cagcggatgttcaaggctgaccaggacgcccaggaaggccaccccgccatcacccctacc
gactggatggccgctaccgccggtgaaactgctgatgagcaggcgctgtaccagctcatt
cgagttcgcgcgcttgccagccagatcgaagctgccgtgtacgcagtgcgaaccatcacc
ctcctgggcgtcggccccgacaaaaagccgctgcgcttcggcgccaaagggaagctgttg
aacgtgcctggctggagaaaactgctgcagggcgatgatgccgaggagcaaaagaacgaa
acgccctcaaaccccatcccggcgctggagccaggccagatcctcaaggtctacagcggc
gaggtcctggagaagaaaaccacccctcccaagcgatttaccgatgccagcctggtgggc
gaaatgaagcgccgcgggattggtcggccatcctcctacgcctcgatcgtgaagaacatc
atcgacaagggcctggtgcagatgaagggccgaagcctgatccccggcgagctgggagag
gccaccatcgcgctcctggagcacaacttcagcttcctcagcctcgacttcacccgcaac
ctcgaggtcgccttggaccggatcgccaacagcgaggacacctacatgaacgtggtccag
cagttctaccagctactacagacagagctgcagacactccgcgcgctccctagcgcacag
gacgaaccacgcgaaagctccactgccagtatctcctcggcgccgaccagcgacttcctt
tgtggcaagtgcggtctgcccctggttcaccgcaagaaagccggcaagggcggcttcgac
ttctggggttgcagcggctatcgcaccatagggtgcaaggtcagctaccccagcaagagc
ggccgacctgacttcgacaacccgcgcgggctatag
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