Pseudomonas aeruginosa DK2: PADK2_24965
Help
Entry
PADK2_24965 CDS
T02161
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pdk
Pseudomonas aeruginosa DK2
Pathway
pdk00550
Peptidoglycan biosynthesis
pdk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PADK2_24965
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pdk01003
]
PADK2_24965
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdk01011
]
PADK2_24965
Enzymes [BR:
pdk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PADK2_24965
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PADK2_24965
Glycosyltransferases [BR:
pdk01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PADK2_24965
Peptidoglycan biosynthesis and degradation proteins [BR:
pdk01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PADK2_24965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
PBP_1A_C
UvrB_inter
PBP1c_linker_2
Motif
Other DBs
NCBI-ProteinID:
AFM67256
LinkDB
All DBs
Position
complement(5379400..5381724)
Genome browser
AA seq
774 aa
AA seq
DB search
MTRPRSPRSRNSKARPAPGLNKWLSWALKLGLVGLVLLAGFAIYLDAVVQEKFSGRRWTI
PAKVYARPLELFNGLKLSREDFLRELDALGYRREPSVSGPGTVSVAASAVELNTRGFQFY
EGAEPAQRVRVRFNGNYVSGLSQANGKELAVARLEPLLIGGLYPAHHEDRILVKLDQVPT
YLIDTLVAVEDRDFWNHHGVSLKSVARAVWVNTTAGQLRQGGSTLTQQLVKNFFLSNERS
LSRKINEAMMAVLLELHYDKRDILESYLNEVFLGQDGQRAIHGFGLASQYFFSQPLAELK
LDQVALLVGMVKGPSYFNPRRYPDRALARRNLVLDVLAEQGVATQQEVDAAKLRPLGVTR
QGSMADSSYPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQEKAETSVNETLKRLS
GRKGVDQVEAAMVVTNPETGEIQALIGSRDPRFAGFNRALDAVRPIGSLIKPAVYLTALE
RPSKYTLTTWVQDEPFAVKGQDGQVWRPQNYDRRSHGTIFLYQGLANSYNLSTAKLGLDV
GVPNVLQTVARLGINRDWPAYPSMLLGAGSLSPMEVATMYQTIASGGFNTPLRGIRSVLT
ADGQPLKRYPFQVEQRFDSGAVYLVQNAMQRVMREGTGRSVYSQLPSSLTLAGKTGTSND
SRDSWFSGFGGDLQAVVWLGRDDNGKTPLTGATGALQVWASFMRKAHPQSLEMPMPENVV
MAWVDAQTGQGSAADCPNAVQMPYIRGSEPAQGPGCGSQNPAGEVMDWVRGWLN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtccccgatccccccgttcccgtaacagcaaagcacgcccggcacccggcctg
aacaaatggctcagctgggctctcaagctcggcctcgtcggcctggtgctcctcgccggc
ttcgccatctatctcgatgccgtggtgcaggagaaattctccggccggcgctggaccatc
ccggcgaaggtctatgcccgcccgctggagctgttcaacggcctgaagctgagcagggaa
gacttcctgcgcgaactcgacgccctcggctaccgtcgcgagcccagcgtgagcggccct
ggaaccgtatcggtggcggccagcgcggtcgaactcaatacccgtggcttccagttctac
gaaggcgcggaaccggcccagcgcgtgcgcgtgcgcttcaacggcaactacgtcagcggg
ctgagccaggccaacggcaaggaactggcggtggcgcgccttgagccgctgctgatcggc
ggcttgtatccggcgcaccatgaggatcgcatcctggtcaagctcgaccaggtgccgacc
tacctgatcgacaccctggtcgcggtcgaggatcgcgacttctggaaccaccatggtgtg
tcgctgaaatccgtggcgcgggcggtgtgggtcaacaccacggccggccagttgcgccag
ggcggcagcaccctgacccagcagttggtgaagaacttcttcctgagcaatgagcgcagc
ctgagccgcaagatcaacgaagcgatgatggcggtgctgctggaactgcactacgacaag
cgcgacatcctcgagtcctatctcaacgaggtgttcctcggccaggatgggcaacgagcg
atccatggcttcggcctggccagccagtatttcttcagccagccgttggccgagctcaag
ctcgaccaggtggcgctgctggtcggcatggtcaaggggccgtcctacttcaacccgcgg
cgttacccggatcgtgcgctggcgcggcgcaacctggtgctcgacgtgctcgccgagcag
ggcgtggcgacccagcaggaagtcgacgccgccaagctgcgcccgctcggcgtgacccgg
cagggcagcatggccgacagctcctatccggccttcctcgacctggtcaagcgccagttg
cgccaggactaccgcgacgaggacctgactgaggaagggctgcgcatcttcaccagcttc
gatccgatcctgcaggagaaggccgagacctccgtcaacgaaacgctcaagcgtctcagt
gggcgcaagggggtcgaccaggtcgaggcggcgatggtcgtgaccaatccggaaaccggt
gagatccaggccctgatcggcagtcgcgacccgcgcttcgccggcttcaaccgggccctg
gacgcggtgcggccgatcggttcgctgatcaagccggcggtctacctgaccgctctcgag
cggccgagcaagtacaccctgaccacctgggtacaggacgagcccttcgcggtgaaaggc
caggacggccaggtctggcgaccgcagaactacgaccggcgctcgcatggcacgatcttc
ctgtaccagggcctggcaaactcctacaacctgtccaccgccaagctcggcctcgacgtc
ggtgtgcccaacgtgctgcagaccgtcgcccggctgggtatcaaccgtgactggccggcc
tatccgtcgatgctgctgggcgccggttcgctcagtccgatggaggtcgccaccatgtac
cagaccatcgccagcggcggcttcaacacgccgttgcgggggatccgcagcgtcctcact
gccgacggccagccgctcaagcgctatccgttccaggtcgaacagcgcttcgactcgggc
gccgtctacctggtgcagaacgccatgcagcgggtcatgcgcgaaggcaccgggcgttcg
gtgtacagtcaattgccgtcgtcgctgaccctcgccggcaagaccggcaccagcaacgac
tcgcgcgatagctggttctccggtttcggcggcgacctccaggctgtggtctggctcggt
cgcgacgacaacggcaagacgccgcttaccggcgccaccggtgccttgcaggtgtgggcc
agcttcatgcgcaaggcgcatccgcaatcgctggaaatgccgatgccggagaacgtggtg
atggcctgggtcgacgcgcagaccgggcagggctcggcggcggattgcccgaatgccgta
cagatgccctatattcgtggcagcgagcccgcccagggcccaggctgcgggagtcagaac
cccgccggcgaggtgatggactgggtacgtggctggctgaattga
DBGET
integrated database retrieval system
