Pyrodictium delaneyi: Pyrde_0100
Help
Entry
Pyrde_0100 CDS
T04114
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
pdl
Pyrodictium delaneyi
Pathway
pdl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Pyrde_0100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdl03021
]
Pyrde_0100
Transcription machinery [BR:
pdl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Pyrde_0100
Prokaryotic type
Archaeal type
TFB
Pyrde_0100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_Tnp_ISL3
Cyclin_C
Sigma70_r4
Zn_ribbon_Nudix
HTH_50
HTH_AsnC-type
HTH_24
Trm112p
HTH_37
Sigma70_r4_2
CsoSCA_N
MarR_2
Auto_anti-p27
HTH_Tnp_4
DUF7573
Zn_ribbon_RRN7
DUF4428
zf_Rg
Cyclin_N
Zn_ribbon_TFIIB
A2L_zn_ribbon
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ALL00150
UniProt:
A0A0P0N1V2
LinkDB
All DBs
Position
complement(80564..81445)
Genome browser
AA seq
293 aa
AA seq
DB search
MTMMDKCPSCGGPLSIYARRQSDGRLVCTSCGFVLEESPIDSGPEWRSFTEEDRTRRSRV
GAPLTARVHDKGLTTYIYAPRSDIRARKLVAIQASLRSHGHKKLIKVLQEANRVAARLQL
PSRVAETMARIIRQLQSLGVLKKNNINEYLAAAAVVAARIERHPLTMRDVAETLGLSEQD
VWRAYRRIVTRLKVRVTTPPKPQMYVSKIASKLGLNGEVEALATRFTIMLARTGLAQGKP
PEALAAAAVYVSSILLDQKRNQLTVAKAIGVTDATIRNRYRDIVDNFYIEVRL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatggataagtgtccaagctgtggcggccctctatccatatatgcgcgtaga
caaagtgacggaagactcgtatgtacatcatgtggttttgtgctagaggagtcgccgata
gactcgggtccagagtggcgcagctttaccgaagaggataggacgcgaaggagccgtgtt
ggcgcaccgcttaccgcacgtgtacatgacaaagggttaaccacgtacatatatgctcct
cggagtgatatacgcgcaaggaagcttgtcgcgatacaagccagtctccgaagtcatgga
cacaagaaactcattaaggttctccaggaggccaaccgtgtcgctgcacgactacaactt
ccgtcacgtgtagcagagactatggcacggattattaggcaactccaaagcctcggcgtc
ttgaagaagaacaacatcaacgagtacttagcagctgcagctgtcgttgcagcccgtata
gagagacacccacttacaatgcgcgacgtagccgagactctcggtctaagcgagcaagac
gtatggagagcttaccgccgaattgtaacaagactcaaggttcgcgtcacaaccccacca
aaaccccaaatgtatgtatcaaagatagcctctaagctgggcttgaacggcgaagtagag
gcgctagctaccaggttcaccataatgctcgcaaggactggcctagcacagggtaagccc
ccagaggcgctagcagctgcagctgtctacgtctcgtctatactacttgaccagaagagg
aaccagctaacagtggcaaaggctataggcgtaaccgacgccactatacgcaacaggtac
cgcgacatagtggacaacttctacatagaggttcgtctttaa
DBGET
integrated database retrieval system
