Pyrodictium delaneyi: Pyrde_0348
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Entry
Pyrde_0348 CDS
T04114
Name
(GenBank) hydroxymethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pdl
Pyrodictium delaneyi
Pathway
pdl00730
Thiamine metabolism
pdl01100
Metabolic pathways
pdl01240
Biosynthesis of cofactors
Module
pdl_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
pdl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Pyrde_0348
Enzymes [BR:
pdl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Pyrde_0348
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
Met_asp_mut_E
Motif
Other DBs
NCBI-ProteinID:
ALL00398
UniProt:
A0A0P0N2N7
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All DBs
Position
343432..344808
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AA seq
458 aa
AA seq
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MAKTIMQVARGGGTPEELETLSKLEGVPVEKLRARLAQGRIAVLRNVRRLGRVRIVGVGE
GLFTKVNVNIGTSGTVVDVDMEAEKARIAVRYGSDTVMDLSMGGPLDEIRRRLMKEAEPL
PLGTVPTYQAWVEGLRRYGGLTMPSDWFIEVVERQLRDGVDYMTIHAALSRELAEKALKS
SRVIPINSRGGALLAAWMLENREENPYRRHWSYLLELFAEYDAVISVGDSLRPGALADQH
DELQIAELIEAARLVESARRAGVQVIVEGPGHMTLDQIPANVKLMKTLTRGAPYYVLGPL
PTDTAMGYDHIALAIGGAVAAASGADFLCYVTPAEHLSLPTPEQVKEGLIAARIAAHAAD
IAKYGARAARRDAELSLLRAKLDWERMWSYAPDPEHAKRIYHQFPAATKACNMCGQYCAC
MIIDRLSQSRPKPTLQQLLERLGDGGDAAQLLEQLTAP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtggctaagacgattatgcaggttgctcggggcggcgggacgccagaggagcttgagact
ctatccaagcttgagggtgtgcccgtcgagaagctgcgagcccggctggcccagggcagg
atagcagttctccgcaacgtccgccggctcggcagagtgaggatcgtcggcgtcggggag
gggctcttcaccaaagtcaacgtgaacattgggactagtggcactgtggtcgacgtcgat
atggaggctgagaaggcccggatagcagtgcgctacggcagcgacacggttatggatctc
agcatgggcgggcccctggacgagatacggcgtcgcctcatgaaggaggctgagcccctc
ccactaggcacagtgccgacttaccaggcctgggtcgagggcctccgacgctacggaggc
ctcacaatgcccagcgactggttcatagaggttgtggagaggcagctccgggacggcgta
gactacatgactatacatgccgcgctatcccgggagctcgccgagaaggcgctgaagagc
agcagggttataccgataaacagtcgcggcggcgccctcctcgcagcctggatgctcgag
aacagggaggagaacccctaccgcaggcactggagctacctcctagagctcttcgccgag
tacgacgccgtgataagcgtgggcgatagcctccggcccggcgccctggcggaccaacac
gatgagctacagatcgcggagctgatagaggccgcgcggctcgtggagagcgctcgtagg
gccggggtgcaggttatagttgagggccccggccacatgacactcgaccagatacccgcc
aacgtcaagctaatgaagacgctgaccaggggcgccccatactacgtgctaggccccctg
ccgaccgacaccgcgatgggctacgaccacatagccctagcgataggcggcgccgtggcg
gctgcaagtggcgccgacttcctatgctatgtgacgcccgccgagcacctaagcctgccg
acacctgagcaggtcaaggagggcctcatagcggcgcggatagcagcccatgcagccgac
atagccaagtatggtgccagggcagcccgccgggacgcagagctaagcctcctccgggca
aagctagactgggagcgtatgtggagctacgcgcccgacccagagcacgccaagaggata
taccaccagttcccggcagccaccaaggcctgcaatatgtgcggccagtactgcgcctgc
atgataatagaccggctcagccagagcaggccaaagccgacgctacaacagctactagaa
aggctaggagacggaggcgacgcagcacagctactagaacagctcacagcaccctag
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